Coffea arabica (coffee): 113716228
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Entry
113716228 CDS
T11342
Name
(RefSeq) protein PHYLLO, chloroplastic-like isoform X1
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00130
Ubiquinone and other terpenoid-quinone biosynthesis
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
carb01240
Biosynthesis of cofactors
Module
carb_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
113716228
Enzymes [BR:
carb01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
113716228
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
113716228
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
113716228
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
113716228
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MR_MLE_C
Abhydrolase_1
TPP_enzyme_N
TPP_enzyme_M_2
Abhydrolase_6
Hydrolase_4
Ndr
TPP_enzyme_C
BAAT_C
Abhydrolase_2
Cutinase
Abhydrolase_3
DLH
Lipase
Abhydrolase_11
MenC_N
DUF1057
Thioesterase
Esterase
DUF900
DUF676
Ser_hydrolase
LIDHydrolase
Motif
Other DBs
NCBI-GeneID:
113716228
NCBI-ProteinID:
XP_071926843
UniProt:
A0ABM4W4X4
LinkDB
All DBs
Position
11c:40803534..40823771
Genome browser
AA seq
1738 aa
AA seq
DB search
MMMNHQILQRSHNFPSLPLFPRSVPRHLRNLIPFPGLSYASKHYNKYPLQRRLSLLCASQ
NANSEVVIDSRKEEREMELEEAAILMSTCITRTLPAALTLEEGLNRIEEAIQFLMAKPPS
SSSGMFRFQVAVPPSAKALNWFCSQPESDGVFPQFYLSKEKENPTYKSLALGRTRGVFGI
GSALSFNARYTNGSENGDATSEGHLSVELTFPRVYGFLDTNVDKILASIEHETGSFYLFI
PQIELDEFEDTSILAATLAWNDSSLCTFYEAIQTYELSLFQARINFLSTTQECSRNCISS
TVQKFNIMEDKSIQMVRLNAVRLRGNFLQSGSEELASDLFCQFSARFSPTLAVANNMYQI
DRFNLTSYYENDCPNINTLWASLIIEECVRLGVTYFCIAPGSRSSPLTLAASAHPLTTCV
VCIDERSLAFNALGYARGSHRPAVVITTSGTAVSNLLSAVVEASEDFVPLILLTADRPPE
LLDAGANQAINQVNHFGQFTKHFFGLPVPTDDISSRMVLTTLDSAVYMATTSPYGPVHIN
CPFREPLGNIQTTWESRGLKGLENWMSTSEPFTTYSQVQHSVSSNQCHGLMAELVKLIQG
AKQGLLVLGALHTEDDIWAALLLAKHLNWPVVAGILSGLRLRKYMASFSEIEENIIFLDH
LDQMLLSGAVNDWMQADVIIQIGGRLVSKRISKMLEGCFPCSYIMVDKHPKRHDPSHIVT
HRIQSTIMEFTVCVTKACIPHDNTRWKAFLRVLNSMAAREISSLIDLEQSLTEPYIAHVA
LENLRCNSAIFIGNSMAIRDADMYGYNWAKCTHETSEMLSSGFQCHRIQVAGNRGTGGID
GLLSTAVGFGVGCNKHVLCLIGDVSFLYDTNGLSLLRQGVLRKPMIVIVINNQGGAIFSL
LPYAKLTDHKILDQFFYTSHDVAIGDLCMAHGMKHAQVQTKKELGEALLTAQQENCDHVI
EVKSCIDNTATFHSHLGASISQAIDHSLGVLSKLSQSETTLHGSSSIRISKMEYSLYRIP
LRAPPTSSSGNNNSSIFYREGFVISLCLEGGGTGFGEVAPLEIHRENLLEVEEQLRFLIH
VIEGRESTYFLSLLNGSISSWIWNCLGISPDSLFPSVRCGLEMAILNAIAASKSSSLIDI
FHPRTGELHTKGTAVKICGLIDSIGGPTDMASAASALVEEGFAAIKIKVARRSNPIEDAM
VIQEVRRKVGNHVEIRVDANRGWTFSEAAEFANLVKNCNLQYIEEPVKDEDDIVKFCEET
NLPVALDETVNNTRANPLEVINNYTHSGIVAVVIKPSMLGGFENAALVAQWAQKQGKMAI
VSATFESGLGLSAYTQFSSYLNLQNAEIRRLMKKERSLCLAHGLGTYKWLKEDLSVKPAE
VHFNSNNGFVGASVVDTAQFLQRFQVNQNVIVRTFDEEQVRNYQLPVDFEGVSYSINVLE
TGKRVGDYVFVFLHGFLGRGEDWIPIMKAFSRSVRCIAIDLPGHARSDVKYQADNGSMKR
HSLSVDAIAGMLCKFITNVTSEKVILVGYSMGARIALHMALKYDDKIDGAVIISGSPGLT
DPGARKFRRAKDDFRASSLVSHGLEHFLGAWYVEEIWNSLRSHPHFSEIVTDRLQHDDLH
TLAKVLSDSSIGRQQPLWEDLKQCNLPLLLIVGEDDAKFKQIAKRMLHKISHSTRMKATP
AIVEVPKSGHAAHLENPLHVIYSLRQFLNRVKTLSSLQTQNAVVDSHRDIPRQVSKTM
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaaccaccaaattttacaacgttctcataacttcccttccctccccctcttt
ccccgttcagtgccccgccacctcagaaatttgatcccttttcccggcttaagttatgct
tccaaacactacaacaaatatcctctccagcggcggctctctctcctgtgtgcctcccaa
aatgcaaactcagaggttgttatagattcaaggaaagaagaaagagaaatggagcttgaa
gaggctgcaattctgatgtccacatgcattactagaactttgcctgctgcattgactctt
gaggaaggtttgaacaggattgaggaggctattcaattcttgatggctaagccgccttcc
tcttctagtgggatgttcaggttccaggttgctgttcctccaagtgcaaaggctttgaac
tggttttgcagccaaccagagtcagatggggtgtttcctcaattttatctttcaaaagag
aaggagaatccaacatataaatcacttgctctgggacgaactcgtggggtattcggaata
ggttcagcactatcttttaatgcccggtacacgaatggttccgaaaatggcgatgcaaca
agtgaaggacatctatctgttgaacttacatttccaagagtatatggctttctggatact
aatgttgacaagatattggcctccattgagcacgagactggttcattctacctcttcatc
ccacagattgagttggatgagtttgaggatacctctatcttggctgcaacccttgcatgg
aatgattcctccttatgtacattttatgaagccattcaaacgtatgaattatctcttttc
caggcgagaattaattttttgtcaaccacacaagaatgcagccgaaattgcatctcttcc
actgtacagaagttcaacataatggaggataaaagtatccaaatggtacgtctaaatgct
gttcgattaagaggaaattttcttcagtctggctcggaggaactggcttctgatttattc
tgtcagttctctgcgaggttctctcctacactggctgttgccaataacatgtatcagatt
gatcgttttaatcttacaagctactacgaaaatgattgccccaacattaataccttatgg
gcttcacttattattgaagaatgtgttcgacttggtgtaacgtatttttgcatagctccg
ggatcgcgatcatctccacttacacttgctgcttctgctcatccacttactacttgtgtc
gtgtgcatagacgagcgctcacttgcctttaatgctcttggttatgctagaggttctcat
agaccagcagtagttataacaacatcaggcacggctgtttcaaatcttctctctgctgtg
gtggaggccagtgaagattttgtaccacttatattactcactgctgaccgtcccccagag
ctactagatgctggagcgaaccaagcaattaaccaggtcaatcattttggacagttcacg
aagcatttttttggtcttccagtgcccactgatgatatctcttctagaatggtcctcact
acacttgactctgctgtttacatggctaccacttcaccctatggtcctgtccatatcaat
tgtcctttcagagaaccattagggaacattcagacgacatgggagagtagaggtttaaag
ggattagaaaattggatgtcaacttcagaaccatttacaacctattcccaggttcagcat
tctgtttcatctaatcagtgtcatggacttatggctgaattggtcaagctaattcaagga
gcgaagcaagggcttttagtgcttggtgctcttcatacagaggatgacatatgggcagct
cttctccttgctaaacacctgaattggccagttgttgctggcatcttgtcagggttacgc
ttaagaaaatatatggcttccttttcagaaattgaagaaaacattatattcctagatcac
ctagatcaaatgcttctctcaggtgcagtcaatgactggatgcaagctgatgtgataatt
cagattggtggtcggttagttagcaaacgcatttcaaagatgcttgaaggttgctttcct
tgctcctatataatggttgacaagcatccaaaacgtcatgatccttctcacattgtaacg
cacaggatccagagtaccatcatggagttcactgtttgtgtaacaaaagcttgtattcca
catgataacaccagatggaaagcatttctacgagttctcaactcaatggctgcccgagaa
atctcgtctctgattgatttagaacagtctttgactgaaccttatattgcacatgtagca
ttggaaaatcttcgatgtaactctgctatatttatcggaaacagcatggcaatacgcgat
gcagacatgtatgggtataactgggcaaaatgtacccatgaaacttcagagatgctgagc
tcaggattccaatgtcaccgtattcaggttgctgggaatagaggaactggtggcatagac
gggctgcttagcacggctgttggatttggtgttggctgcaacaaacatgttctttgtcta
attggagatgtttcttttctgtatgacacaaatggactgtcactactgagacaaggggta
ttgcggaagccaatgattgtaattgtaataaacaatcagggtggtgcaattttcagtctc
ctgccatatgcaaagctgacagatcacaaaattctagatcaatttttctacacatctcat
gatgttgctattggggatctatgcatggcacatggcatgaagcatgcacaagttcagaca
aagaaggaattgggtgaagctttattaacagcccagcaagaaaactgtgaccacgtcata
gaagtaaagagctgcattgataacacagcgacctttcacagtcatttgggggcatccatt
tctcaggccattgatcattctttaggtgtgctttcaaagctttcacaatcagaaacaacc
ttacatggaagttcaagtattagaatctctaaaatggagtattctctgtacaggattcca
ttaagagctccaccaacttcatcttctggcaataataactcttccatattctacagagaa
ggatttgtcataagcttgtgccttgagggtggaggtactgggtttggggaggtggcaccc
cttgaaatacacagagaaaacctgctggaagttgaagagcaacttcgctttcttattcat
gttatagaaggaagagaaagtacttattttctttcactactcaatgggtctatatcatct
tggatatggaattgcttgggaatatcgccagattccctatttccaagtgtgagatgcggc
ttggagatggctatactcaatgctattgcagccagcaaatcttccagtttaatagacata
ttccatccaaggacaggagaattacatacaaaggggacagctgtgaagatatgtggcctc
attgattccattggaggtcccacagatatggcttctgctgcatctgcccttgttgaagag
ggttttgctgctataaaaataaaggtggcacgtaggagcaaccccatcgaggatgccatg
gttatacaagaggttagaagaaaagtggggaatcatgttgaaatccgtgttgatgccaac
agaggttggacattttctgaagcagcagagtttgctaatttggtgaaaaactgcaaccta
cagtatattgaggaacctgttaaggatgaagatgatattgtcaaattttgtgaagaaact
aacttacctgtggctcttgatgagaccgtgaacaatacaagagcaaatcccctggaggtc
ataaacaattacacgcactctggaattgttgcggtggttattaaaccaagcatgcttggg
ggttttgagaatgcagcattggttgctcaatgggctcagaagcaagggaagatggcgatt
gttagtgctacatttgagagtggcttgggactgtctgcctatactcagttctcaagttat
ctcaatctgcaaaatgctgaaatacgtaggttgatgaaaaaggaacgatcactatgctta
gctcatggtctggggacctacaaatggcttaaagaagatttgagtgtaaagcctgcagag
gtccatttcaattcaaacaatggatttgtaggggcctctgttgttgatactgctcaattc
ctgcagaggtttcaagtcaaccaaaatgtcattgttcgaacttttgatgaagaacaagtt
cgtaactaccagctacctgttgattttgagggtgtctcctattccatcaatgtgctagag
acgggaaaaagagttggagactatgtattcgtctttcttcatggctttcttggaaggggt
gaagattggatacccatcatgaaagccttctcaagatcagtaagatgcatagcaattgac
cttccaggtcatgccagatctgacgtgaaatatcaggctgataatggttccatgaagcgg
cacagtttgtcagttgatgctattgctggaatgttatgcaagtttattactaatgtgacc
tctgaaaaggttattcttgttgggtactcaatgggagcaaggatcgccttacacatggct
ttaaaatatgatgataagattgatggagctgttataatctccggaagccctggattgaca
gatcctggggcaaggaagttccgtcgagcaaaagatgatttcagagccagctcccttgtt
tctcacggcctagagcactttttaggtgcctggtatgttgaggagatatggaatagctta
aggagccatccacatttcagtgaaatagtcactgatcgcttgcagcatgatgatttgcac
acccttgctaaagtactgtctgattcaagtattgggagacaacaaccattgtgggaagac
ctgaagcagtgcaacctaccacttctactcattgttggagaggatgatgccaagtttaaa
caaattgccaaaaggatgctccataaaatcagccatagcaccaggatgaaggctactcca
gcaatagtcgaagttccaaaatctggccacgctgcacatcttgagaatcctcttcatgta
atatattctttaaggcagttcttgaacagagtcaaaaccttgagttcacttcaaacgcaa
aatgcagtggtagatagtcatcgtgacattccccgtcaggtttcaaagacaatgtaa
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integrated database retrieval system
