Coffea arabica (coffee): 113716230
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Entry
113716230 CDS
T11342
Name
(RefSeq) protein PHYLLO, chloroplastic isoform X1
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00130
Ubiquinone and other terpenoid-quinone biosynthesis
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
carb01240
Biosynthesis of cofactors
Module
carb_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
113716230
Enzymes [BR:
carb01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
113716230
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
113716230
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
113716230
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
113716230
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MR_MLE_C
Abhydrolase_1
TPP_enzyme_N
TPP_enzyme_M_2
Abhydrolase_6
Hydrolase_4
Ndr
TPP_enzyme_C
BAAT_C
Abhydrolase_2
Cutinase
Abhydrolase_3
DLH
Lipase
Abhydrolase_11
MenC_N
DUF1057
Thioesterase
Esterase
DUF900
DUF676
Ser_hydrolase
LIDHydrolase
Motif
Other DBs
NCBI-GeneID:
113716230
NCBI-ProteinID:
XP_071928565
UniProt:
A0ABM4W9V0
LinkDB
All DBs
Position
11e:57684503..57704139
Genome browser
AA seq
1738 aa
AA seq
DB search
MMMNHQILQRSHNFPSLPLFPRSVPRHLRNLIPFPGLNYASKHYNKYPLQRQLSLLCASK
NANSEVVIDSRKEEREMELEEAAILMSTCITRTLPAALTLEEGLNKIEEAIQFLMAKPPS
SSSGMFRFQVAVPPSAKALNWFCSQPESDGVFPQFYLSKEKENPTYKSLALGRTRGVFGI
GSALSFNARYTNGSENGDATSEGYLSVELAFPRVYGFLDTNVDKILASIEHETGSFYLFI
PQIELDEFEDTSILAATLAWNDSSLCTFYEAIQTYELSLFQARINFLSTTQECSRNCNSS
TVQKFNIMEDKSIQMVRLSAVRLRGNFLQSGSEELASDLFCQFSARFSPTLAVANNMYQI
DRFNLTSYYENDCPNINTLWASLIIEECVRLGVTYFCIAPGSRSSPLTLAASAHPLTTCV
VCIDERSLAFNALGYARGSHRPAVVITTSGTAVSNLLSAVVEASEDFVPLILLTADRPPE
LLDAGANQAINQVNHFGQFTKHFFGLPVPTDDISSRMVLTTLDSAVYMATTSPYGPVHIN
CPFREPLGNIQTTWESRGLKGLENWMSTSEPFTTYSQVQHSVSSNQCHGLMAELVKLIQG
AKQGLLVLGALHTEDDIWAALLLAKHLNWPVVAGILSGLRLRKYMASFSEIEENIIFLDH
LDQMLLSGAVNDWMQADVIIQIGGRLVSKRISKMLEGCFPCSYIMVDKHPKRHDPSHIVT
HRIQSTIMEFTVCVTKACIPHDNTRWKAFLRVLNSMAAREISSLIDLEQSLTEPYIAHVA
LENLRCNSAIFIGNSMAIRDADMYGYNWAKCTHETSEMLSSGFQCHRIQVAGNRGTGGID
GLLSTAVGFGVGCNKHVLCLIGDVSFLYDTNGLSLLRQGVLRKPMIVIVINNQGGAIFSL
LPYAKLTDHKILDQFFYTSHDVAIGDLCMAHGMKHAQVQTKKELGEALLTAQQENCDHVI
EVKSCIDNTATFHSHLGASISQAIDHSLGVLSKLSQSETTLHGSSSIRISKMEYSLYRIP
LRAPPTSSSGNNNSSIFYREGFVISLCLEGGGTGFGEVAPLEIHKENLLEVEEQLRFLIH
VIEGRESTYFLSLLNGSISSWIWNCLGISPDSLFPSVRCGLEMAILNAIAASKSSSLIDI
FHPRTGELHTKGTAVKICGLIDSIGGPTDMASAASALVEEGFAAIKIKVARRSNPIEDAM
VIQEVRRKVGNHVEIRVDANRGWTFSEAAEFANLVKNCNLQYIEEPVKDEDDIVKFCEET
NLPVALDETVNNTRANPLEVINNYTHSGIVAVVIKPSMLGGFENAALVAQWAQKQGKMAI
VSATFESGLGLSAYTQFSSYLNLQNAEIRRLMKKEPSLCLAHGLGTYKWLKEDLSVKPAE
VHFNSNNGFVGASVVDTAQFLQRFQVNQNVIVRTFDEEQVRNYQLPVDFEGVSYSINVLE
TGKRVGDYVFVFLHGFLGRGEDWIPIMKAFSRSVRCIAIDLPGHARSDVKYQADNGSMKR
HSLSVDAIAGMLCKFITNVTSEKVILVGYSMGARIALHMALKYDDKIDGAVIISGSPGLT
DPGARKVRRAKDDFRASSLVSHGLEHFLGAWYVEEIWNSLRSHPHFSEIVTDRLQHDDLH
TLAKVLSDSSIGRQQPLWEDLKQCNLPLLLIVGEDDAKFKQIAKRMLHKISHSTRMKATP
AIVEVPKSGHAAHLENPLHVIYSLRQFLNRVKTLSSLQTQNAVVDSHRDIPRQVSKIM
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaaccaccaaattttacaacgttctcataacttcccttccctccccctcttt
ccccgttcagtgccccgtcacctcagaaatttgatcccttttcccggcttaaattatgct
tccaaacactacaacaaatatcctctccagcggcagctctctctcctgtgtgcctccaaa
aatgcaaactcagaggttgtgatagattcaaggaaagaagaaagagaaatggagcttgaa
gaggctgcaattctgatgtccacatgcattactagaactttgcctgctgcattgactctt
gaggaaggtttgaacaagattgaggaggctattcaattcttgatggctaagccgccttcc
tcttctagtgggatgttcaggttccaggttgctgttcctccaagtgcaaaggctttgaac
tggttttgcagccaaccagagtcagatggggtgtttcctcaattttatctttcaaaagag
aaggagaatccaacatataaatcacttgctctgggaagaactcgtggggtattcggaata
ggttcagcactatcttttaatgcccggtacacgaatggttcagaaaatggcgatgcaaca
agtgaaggatatctatctgttgaacttgcatttccaagagtatatggctttctggatact
aatgttgacaagatattggcctccattgagcacgagactggttcattctacctcttcatc
ccacagattgagttggatgagtttgaggatacctctatcttggctgcaacccttgcatgg
aacgattcctccttatgtacattttatgaagccattcaaacgtatgaattatctcttttc
caggcgagaattaattttttgtcaaccacacaagaatgcagccgaaattgcaactcttcc
actgtacagaagttcaacataatggaggataaaagtatccaaatggtacgtctaagtgct
gttcgattaagaggaaattttcttcagtctggctcggaggaactggcttctgatttattc
tgtcagttctctgcgaggttctctcctacactggctgttgccaataacatgtatcagatt
gatcgttttaatcttacaagctactacgaaaatgattgccccaacattaataccttatgg
gcttcacttattattgaagaatgtgttcgacttggtgtaacgtatttttgcatagctccg
ggatcgcgatcatctccacttacacttgctgcttctgctcatccacttactacttgtgtc
gtgtgcatagacgagcgctcacttgcctttaatgctcttggttatgctagaggttctcat
agaccagcagtagttataacaacatcaggcacggctgtttcaaatcttctctctgctgtg
gtggaggccagtgaagattttgtaccacttatattactcactgctgaccgtcccccagag
ctactagatgctggagcgaaccaagcaattaaccaggtcaatcattttggacagttcacg
aagcatttttttggtcttccagtgcccactgatgatatctcttctagaatggtcctcact
acacttgactctgctgtttacatggctaccacttcaccctatggtcctgtccatatcaat
tgtcctttcagagaaccattagggaacattcagacgacatgggagagtagaggtttaaag
ggattagaaaattggatgtcaacttcagaaccatttacaacctattcccaggttcagcat
tctgtttcatctaatcagtgtcatggacttatggctgaattggtcaagctaattcaagga
gcgaagcaagggcttttagtgcttggtgctcttcatacagaggatgacatatgggcagct
cttctccttgctaaacacctgaattggccagttgttgctggcatcttgtcagggttacgc
ttaagaaaatatatggcttccttttcagaaattgaagaaaacattatattcctagatcac
ctagatcaaatgcttctctcaggtgcagtcaatgactggatgcaagctgatgtgataatt
cagattggtggtcggttagttagcaaacgcatttcaaagatgcttgaaggttgctttcct
tgctcctatataatggttgacaagcatccaaaacgtcatgatccttctcacattgtaacg
cacaggatccagagtaccatcatggagttcactgtttgtgtaacaaaagcttgtattcca
catgataacaccagatggaaagcatttctacgagttctcaactcaatggctgcccgagaa
atctcgtctctgattgatttagaacagtctttgactgaaccttatattgcacatgtagca
ttggaaaatcttcgatgtaactctgctatatttatcggaaacagcatggcaatacgcgat
gcagacatgtatgggtataactgggcaaaatgtacccatgaaacttcagagatgctgagc
tcaggattccaatgtcaccgtattcaggttgctgggaatagaggaactggtggcatagac
gggctgcttagcacggctgttggatttggtgttggctgcaacaaacatgttctttgtcta
attggagatgtttcttttctgtatgacacaaatggactgtcactactgagacaaggggta
ttgcggaagccaatgattgtaattgtaataaacaatcagggtggtgcaattttcagtctc
ctgccatatgcaaagctgacagatcacaaaattctagatcaatttttctacacatctcat
gatgttgctattggggatctatgcatggcacatggcatgaagcatgcacaagttcagaca
aagaaggaattgggtgaagctttattaacagcccagcaagaaaactgtgaccacgtcata
gaagtaaagagctgcattgataacacagcgacctttcacagtcatttgggggcatccatt
tctcaggccattgatcattctttaggtgtgctttcaaagctttcacaatcagaaacaacc
ttacatggaagttcaagtattagaatctctaaaatggagtattctctgtacaggattcca
ttaagagctccaccaacttcatcttctggcaataataactcttccatattctacagagaa
ggatttgtcataagcttgtgccttgagggtggaggtactgggtttggggaggtggcaccc
cttgaaatacacaaagaaaacctgctggaagttgaagagcaacttcgctttcttattcat
gttatagaaggaagagaaagtacttattttctttcactgcttaatgggtctatatcatct
tggatatggaattgcttgggaatatcgccagattccctatttccaagtgtgagatgcggc
ttggagatggctatactcaatgctattgcagccagcaaatcttccagtttaatagacata
ttccatccaaggacaggagaattacatacaaaggggacagctgtgaagatatgtggcctc
attgattccattggaggtcccacagatatggcttctgctgcatctgcccttgttgaagag
ggttttgctgctataaaaataaaggtggcacgtaggagcaaccccatcgaggatgccatg
gttatacaagaggttagaagaaaagtggggaatcatgttgaaatccgtgttgatgccaac
agaggttggacattttccgaagcagcagagtttgctaatttggtgaaaaactgcaaccta
cagtatattgaggaacctgttaaggatgaagatgatattgtcaaattttgtgaagaaact
aacttacctgtggcacttgatgagactgtgaacaatacaagagcaaatcccctggaggtc
ataaacaattacacccactctggaattgttgcggtggttattaaaccaagcatgcttggg
ggttttgagaatgcagcattggttgctcaatgggctcagaagcaagggaagatggcgatt
gttagtgctacatttgagagtggcttgggactgtccgcctatactcagttctcaagttat
ctcaatctgcaaaatgctgaaatacgtaggttgatgaaaaaggaaccatcactatgctta
gctcatggtctggggacctacaaatggcttaaagaagatttgagtgtaaagcctgcagag
gtccatttcaattcaaacaatggatttgtaggggcctctgttgttgatactgctcaattc
ctgcagaggtttcaagtcaaccaaaatgtcattgttcgaacttttgatgaagaacaagtt
cgtaactaccagctacctgttgattttgagggtgtctcctattccatcaatgtgctagag
acgggaaaaagagttggagactatgtattcgtctttcttcatggctttcttggaaggggt
gaagattggatacccatcatgaaagccttctcaaggtcagtaagatgcatagcaattgac
cttccaggtcatgccagatctgacgtgaaatatcaggctgataatggttccatgaagcgg
cacagtttgtcagttgatgctattgctggtatgttatgcaagtttattactaatgtgacc
tctgaaaaggttattcttgttgggtactcaatgggagcaaggatcgccttacacatggct
ttaaaatatgatgataagattgatggagctgttataatctccggaagccctggattgaca
gatcctggggcaaggaaggtccgtcgagcaaaagatgatttcagagccagctcccttgtt
tctcacggcctagagcactttttaggtgcctggtatgttgaggagatatggaatagctta
aggagccatccacatttcagtgaaatagtcactgatcgcttgcagcatgatgatttgcac
actcttgctaaagtactgtctgattcaagtattgggagacaacaaccattgtgggaagac
ctgaagcagtgcaacctaccacttctactcattgttggagaggatgatgccaagtttaaa
caaattgccaaaaggatgctccataaaatcagccatagcaccaggatgaaagctactcca
gcaatagtcgaagttccaaaatctggccacgctgcacatcttgagaatcctcttcatgta
atatattctttaaggcagttcttgaacagagtcaaaaccttgagttcacttcaaacgcaa
aatgcagtagtagatagtcatcgtgacattccccgtcaggtttcaaagataatgtaa
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integrated database retrieval system
