Coffea arabica (coffee): 113716257
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Entry
113716257 CDS
T11342
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3
KO
K11644
paired amphipathic helix protein Sin3a
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113716257
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
113716257
REST complex
113716257
Heterochromatin formation proteins
Other heterochromatin formation proteins
113716257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113716257
NCBI-ProteinID:
XP_071927179
UniProt:
A0ABM4W5W6
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Position
11c:42890943..42902408
Genome browser
AA seq
1384 aa
AA seq
DB search
MKRSRDDTYTSSQLKRPVMSSRAEPSGQSQLMGGSGAQKLTTNDALAYLKAVKDIFQDRR
DKYDEFLEVMKDFKAQRTDTSGVISRVKELFKGHRDLILGFNTFLPKGYEITLPPENEPP
PLKKPVEFEEAISFVNKIKTRFQGDDHVYKSFLDILNMYRKENKKITEVYEEVAALFRDH
SDLLVEFTHFLPETQAAASARNAQLGRNSSLRRDDRGSPMTMATPMHFDKKPSSAHGDYD
PSVDRPDRDPEKVLMRSDKEQRRRFKEEEKRREGRELREQEYDARDLDDGTHHFSHRRKS
GLKEDSDGAYYHQGMQGQALAFREKVKERLLNSDYHREFLRCLHNYSNEIITKSQLENQV
ANLLEGHPDLMEEFNEFVAHDKTGSLWNDGQISRSVKVEDRVTDREWDREERDKDHSNRE
RDRSDRGLAFGFKDVAGPRISSYATKDKFLAKPIQELDLSNCERCTPSYRLLPKNYPIPS
ASHRTEIGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLIESVNTT
TKRVEDLLDKMNDDSSPICVEDHFTALNLRCIERLYGDHGLDVMDVLRKNAPLALPVILT
RLKQKQEEWAKCRSDFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIREIF
DKRSQEDDMLLSTISGRRQPLVPHLKFEYPDPDIHEDLYQLIKYSCGEVCTSEQLDKVMK
IWTTFLEPMLGVRSRPQREDTEIVRKASNCSVRTITNTVCGSDGSPPGSASAIACKQSDA
SKITEESIPSERSTSRNGGNEVKDDDSHDAAHKSDSLGNASQPAKICNDGIVADEFSQIS
KLASLGEQLTSSSADGHERANAENASGSCATPGKPGDVTAEIELQMRASNESQNADCTQP
ESSSAVTAPEGFKIQKFQEESVAHFKMEREEGELSPTGDFEEDNFAECKEVERDAKVNAH
KTQHQDVTGGGETCGGDAVGENDADGDDEGEESARRSSEDSENASGNGDVSASESADGEE
CSPEEPDEDGENDANDNKAESEGEAEGIADAHDVEGDGAVLPHSERFLQAAKPLTKLIPP
GSPEGDKGYQIFYGNDSFYVLFRLHHILYERIHKAKLHSSSAENKWRVSNDTNPTDSYAR
FMNALYSLLDGSADNAKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQTIATEEMNNKLL
QLQAYERSRKPGKFVDCYYNENVHVFLNDENIYRIECSSVPTRLSIQLMDCSFDKPDSNA
VSMDPNFAAYLTEFLSVVVPERKVNPGLYLRRNKRKYMHLDENDAFMEASKGLVMRNGLE
CKINCNTSKVFYVLDTEDLLLRRRKKRRISHENGSCNGHAKSSNGFFNKIWDKLLFSQYA
VLQE
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggtcaagagatgatacgtatacgagttctcaacttaagcgccctgtgatgtct
tctcgtgctgaaccctctgggcaatcacaattgatgggcggaagtggcgcacagaagcta
acgactaatgatgcattggcatatctcaaggctgtaaaggacatctttcaagacagacga
gacaaatatgatgagtttcttgaagtcatgaaggattttaaagctcaaaggactgacaca
tctggtgtcatatcgagagtgaaggaattatttaaaggacacagagacctgattttgggt
ttcaatacctttttaccaaagggatatgaaattacccttccacctgagaatgaaccacct
cctttgaagaagccggttgaatttgaagaagcaatcagttttgtgaacaaaattaagact
agatttcaaggtgatgaccatgtgtataaatcttttcttgacattttgaatatgtacaga
aaggagaataaaaaaatcacagaggtttatgaggaggttgctgctctttttcgtgaccac
agtgaccttcttgttgagttcactcattttttacctgagacccaagctgcagcatctgcc
cgtaatgctcagcttggtcggaattcttccctgcgtcgtgatgacagaggctctcccatg
acaatggcaacgcctatgcattttgataagaaaccttcttcagcacatggggactatgac
ccaagtgttgatcgacctgatcgggatcctgagaaagtactgatgcgatctgacaaggag
cagaggaggcgtttcaaagaagaggagaagagacgagaaggcagagagctaagagaacaa
gagtatgatgctagggatttagatgatgggacacatcatttttctcacaggaggaaatct
ggtctcaaggaagattctgatggcgcttactatcatcaaggcatgcaaggccaagcgctt
gctttccgtgagaaggtgaaggagagattactgaattctgattatcaccgggaatttttg
aggtgccttcacaactacagcaatgaaataatcacaaaatcccagttggaaaatcaggtg
gctaatttgcttgaaggacatccagaccttatggaagaattcaatgaatttgtagctcat
gataaaactggatccttgtggaatgatggacaaatttctagatcagtgaaggtagaggat
agagtaacagacagagaatgggacagggaagagagagataaagatcatagtaatagagaa
agggacagatctgacagagggttggcctttggttttaaagatgttgctgggcccaggatc
tcctcatatgcaaccaaggataagtttttggcaaaaccaattcaagaacttgacctttct
aactgtgagcgctgcactcccagttatcgacttcttccaaagaattatccaattccttca
gcaagccacagaactgaaattggcgctcaagtactaaatgatcattgggtatctgtcact
tctggaagtgaggattactctttcaaacacatgcgcaagaaccaatacgaggaaagcttg
ttccgttgtgaagatgaccggtttgaattggatatgttgatagagtcggtgaatacgaca
acaaaacgtgttgaagatttgttagacaagatgaatgatgactcgagtccaatatgtgtt
gaagaccactttactgctctaaatcttaggtgcattgaacgtctgtatggtgaccatggg
cttgacgtgatggatgtgctgaggaagaatgcccctcttgcattgccagttatattaact
cgcttaaaacaaaaacaagaggagtgggcaaagtgtcgttctgactttaacaaagtatgg
gctgaaatctatgcgaagaactatcataaatcacttgatcatcgcagcttctattttaaa
cagcaggacacgaaaagcttgagcactaaagcactattagctgagatcagagaaatcttt
gataaaaggagccaagaagatgatatgctgttgtctacaatttctggaaggagacagcct
ttagttcctcacttgaaatttgagtatcctgatcctgatatccatgaagacctatatcaa
ctgatcaaatattcttgtggggaagtttgtacctccgaacagttggataaagttatgaag
atttggaccactttcctggaaccaatgcttggtgttcgctccaggcctcagcgtgaggac
actgagattgttcgaaaggctagcaattgttctgttagaactattaccaatactgtttgt
gggagtgatggtagtcctcctggcagtgcatctgccattgcttgcaaacagtcagatgct
tctaaaattacagaggaaagtattccctctgaacgctcaacttcaagaaatggtggtaat
gaagttaaagatgatgactcacatgatgcagcacataagagtgacagtttaggcaatgct
tcacaacctgcaaagatctgcaatgatggcattgtggcagatgaattttctcagatcagc
aagctagcttctcttggcgagcagctaacgagttctagtgctgatggacatgaaagagct
aatgcagaaaatgcttcaggatcctgtgctactcctggcaaacctggtgatgtcactgct
gaaattgagcttcagatgagagctagtaatgaatctcagaatgctgattgtactcaacct
gagtcatcttcagctgttactgctccagaaggcttcaaaattcagaaattccaagaagaa
tctgtagcccacttcaaaatggagagagaggaaggggaattatctcctactggtgatttt
gaggaggataattttgcagaatgtaaagaggtggaacgtgatgcaaaggttaatgctcat
aagacgcagcatcaagatgtaactggaggaggagaaacttgtggcggagatgcagtcgga
gaaaatgatgccgatggtgatgatgaaggtgaagaaagtgctcgtaggtcatcagaggac
agtgagaacgcttctggaaatggtgatgtttcagcaagtgaatctgctgatggagaggag
tgctctcctgaagagcctgatgaagatggagagaatgatgcaaatgataacaaggctgaa
agtgagggtgaggcagaaggaatagcagatgctcatgatgttgaaggggatggagctgtt
ttgccacactcagaacgatttctgcaggcagctaaacctctaacaaagttaattcctcca
ggatcacctgaaggggataagggttatcagatcttctacgggaatgattccttctatgtg
cttttcaggcttcaccatatactgtatgaaagaatacacaaggcaaagttgcattcttct
tctgctgaaaataaatggagggtttcaaatgatacaaatccaacagactcctatgctagg
tttatgaatgctctttacagtttactagatggttctgctgataatgccaagtttgaggat
gactgccgggctattattggaactcaatcttatcttctttttacattggacaagcttata
tataaacttgtcaaacagctacaaactattgcaaccgaggagatgaacaacaaacttctt
caactacaagcatacgagagatcaagaaaaccgggaaaatttgttgattgctactacaat
gaaaacgtccacgtctttcttaatgatgagaacatttatcgaatagaatgttcatctgtg
ccaacaagattgtctatacagctcatggactgttcgtttgataaaccagattcaaatgct
gtttctatggatccaaactttgcagcttatctgacagagtttctgtctgttgttgttcct
gagagaaaggtcaatcctgggttgtacttgagaagaaataagcggaaatatatgcattta
gatgaaaatgatgctttcatggaggctagtaagggacttgtgatgcgtaatggtctggag
tgtaagattaattgcaacacatcaaaggtattttatgttttagacactgaagaccttttg
ttaaggaggaggaagaagaggagaatttcgcatgagaatggctcatgcaatgggcatgca
aagtcttcaaatggttttttcaataaaatttgggacaaattgctgtttagtcaatatgca
gttctgcaggagtaa
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