Coffea arabica (coffee): 113716583
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Entry
113716583 CDS
T11342
Name
(RefSeq) RAN GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
carb Coffea arabica (coffee)
Pathway
carb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113716583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113716583
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113716583
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_1
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
113716583
NCBI-ProteinID:
XP_027096779
UniProt:
A0A6P6V125
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All DBs
Position
1e:complement(57628257..57632372)
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AA seq
533 aa
AA seq
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MDSKTFSMKLWPPSQSTRLMLVERMTKNLSTPSVLSRKYGLLSKEEAEEDAKQIEVVAFA
SASRHFEKEPDGDGSSAVQLYAKESSKLMLDVIRRGPRTKEDGNFIESDRVRVSHETVFD
ISGGRRAFIDAKEAEELLKPLRDLHNKFTKICFSNTSFGLDSAHVAEPILSSLRDQLTEI
DLSDFIAGRPETEALEVMTIFSSALEGSNLRYLNLSNNALGEKGVRAFAGLLKSQHNLEE
LYLMNDGISEEAARAVCELIPSTDRLRVLHFHNNMTGDEGAVAISELVKHSPLLEDFRCS
SARVGSEGGVALAEALGSCTSLKKLDLRDNMFGVESGIALSKVLRRFSDLTEIYLSYLNL
EDEGSLALANALTESVPSLEVLEMAGNDITAEAAPALAACVAAKQFLTKLNLAENELKDE
GAILIAKALEEGHGQLNEVDLSTNSIRRAGARCLAQAVVSKPGFKLLNINGNFMSDEGVD
EVKEVFENSSCVLGPLDDNDPEGEDYDEEAEEGDDDEGELESKLKGLEIKQEE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggattctaaaactttctctatgaaattgtggccccctagccaaagtaccaggctaatg
cttgtagaaagaatgactaagaatcttagcactccatcagttttgtccagaaagtatggt
cttttgagtaaagaggaagctgaggaggatgctaagcaaattgaagtcgttgcatttgct
tctgcaagccggcactttgagaaggagccagatggagatggaagttctgctgtgcagctc
tatgctaaagaatccagcaagcttatgctggatgttatcagaagaggacccagaacaaag
gaagatggaaattttattgagtctgacagagttagagtatctcatgaaacagtatttgac
atatctggaggtcgtcgggcatttattgatgcgaaagaggctgaggagttgttgaaacca
cttagggatctccacaacaaatttaccaagatctgtttcagcaatacaagttttggcttg
gactcagcacatgttgctgagcctatattgtcatctctcagagaccaactgacagaaata
gacctgtcagatttcattgctggaaggccggagacagaagccctcgaagtcatgaccatc
ttctcgtctgctctggaagggagtaatctcaggtacctcaacctttcaaataacgctttg
ggcgaaaaaggtgttagggcatttgctggactgctaaaatcgcagcataatttggaggag
ctctatctgatgaatgatggtatttcagaggaggctgcacgtgcagtctgtgagctaatt
ccttcaactgataggcttagggttctccattttcataataacatgacaggagatgagggt
gccgttgctatttctgaacttgtgaagcattcgcctctgctggaggacttccgatgttcg
tctgcaagggtaggatctgaaggaggggttgcccttgcagaggctcttggatcatgtacc
agtttaaagaagcttgatttgcgtgacaatatgtttggcgtggaatctggaattgcttta
agcaaggttttgcgaagattttctgatctcactgaaatctaccttagctacttaaatttg
gaagatgaggggtctctagctcttgctaatgctctaacggaatctgttccatcattagag
gttctggagatggctggaaatgatattactgctgaagctgctcctgctttggctgcctgt
gttgctgcaaagcagtttcttacaaaattaaacttggctgagaacgagttgaaggatgag
ggtgccatccttattgccaaggctttggaagagggtcatggacagttaaatgaagtagat
ttgagtacaaactcaatcagaagggctggagcccggtgcttagctcaagctgttgtaagc
aaacctggattcaagttgctgaacattaacggtaatttcatgtctgacgaaggggttgat
gaggtgaaggaggtatttgagaattcttcttgtgtcctgggacctttggatgataacgat
cctgaaggagaagactatgatgaagaggctgaagaaggtgatgatgatgagggtgaattg
gaatctaagctcaagggcctcgaaattaagcaggaggagtaa
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