Coffea arabica (coffee): 113716612
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Entry
113716612 CDS
T11342
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113716612
Transcription factors [BR:
carb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113716612
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
113716612
NCBI-ProteinID:
XP_071926681
UniProt:
A0ABM4W4G7
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Position
11c:32245538..32251617
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AA seq
633 aa
AA seq
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MKDYYHQLEMRNKKESETMAASSSALFLAMRNGEDHIKSKQHHSAGPSSSSAPPPPPPDQ
QQKRRRNQPGTPNPEAEVIALSPHTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKL
KQKTTKEVKRKVYLCPEPTCVHHHPSRALGDLTGIKKHYSRKHGEKKYKCNKCAKKYAVH
SDWKAHTKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAQESARNPPPLGIGASQLFGS
SSNSSTMSMDMSQIGSQMSAGQDHDHQNQPKADMLRLGSARSTGVTGQFDNLIGSSMGSA
LRPSKSMASSSYFLPESDQEDYHLENHSQHEFFSNKTLHHGLMQFSDLQNNSSASAGSSF
FNLSIFPSSSNAGNLGNNSPNSTSNISSSFLFSNLCNSSHHHHASGSSNGGSTLFSDHLV
RQHLSSASIPSHYSTSIQSNNISPYMSATALLQKAAQLSSTTSNSTGAFLKSFTSGASSS
GTKPDPDPISSTQFGGIFGDYNTGNHIYEFMSSITGPRSSIFRPFGGAPHEHDYGYSATK
LNFGEQSLRHRSPSFSNLEQASKMQQNLGVRFGGADQGLTRDFLGVGPAGELVRSMSGGG
FGQREHGVEIKPLDSERKTAPESPPFGGGVNFR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaaagactattatcatcagctggagatgaggaacaagaaagaaagtgaaaccatggcg
gcatcttcatcagcactttttctagcaatgaggaatggagaagatcacatcaaaagcaaa
caacaccattctgcaggaccatcttcatcatcagcaccaccaccaccaccaccagaccaa
caacaaaagaggagaagaaaccagccaggaaccccaaatccagaagcagaagtcatagca
ctatcaccccacaccctaatggcaacaaacaggtttgtatgtgaggtgtgcaacaagggg
ttccaaagggaacaaaatcttcaactgcacagaagaggacataacctcccttggaagctt
aagcagaagactacaaaagaagtgaagcgcaaggtgtatctgtgtcccgagccgacttgc
gtgcaccatcacccttcaagggctcttggtgacctcacaggaatcaagaaacactactca
agaaaacatggtgagaagaagtacaagtgtaacaagtgcgcaaagaagtatgctgttcac
tctgactggaaagcccacacaaaaacctgtggtactagggagtacaaatgtgactgtgga
actcttttctcaaggcgggacagtttcatcactcacagagctttttgtgatgcacttgct
caagaaagtgcaaggaacccacccccattgggaattggtgcgagccaactatttggtagc
agtagcaacagcagcaccatgagcatggacatgtctcaaattggttcccaaatgtctgca
gggcaagatcatgatcatcagaaccagccaaaggctgatatgctacgcctaggaagtgca
aggagtactggagtcactgggcaatttgataacctaatcggatcatcaatgggttcggct
cttcgcccgtcaaaatccatggcttcttctagctacttcttgccagaatctgatcaggaa
gattatcatctggagaatcattctcaacatgagtttttctctaacaaaactcttcatcat
ggcctgatgcaattttctgatcttcagaacaattcaagcgcttctgctggttcgagtttt
tttaaccttagcattttcccaagcagcagcaatgctggtaacttaggtaacaacagtccc
aacagcaccagcaacatatcttcgagcttcctgttttcaaacttatgcaacagcagccac
catcatcatgcaagtggaagtagcaatggagggtcgaccttattctctgatcatcttgtt
cgccagcacctgagctctgcctccatcccttctcactacagcacttcgattcaaagcaat
aacattagcccatatatgtcagcaactgccctgcttcaaaaggctgctcaactgagctca
acaaccagcaactctaccggggctttcctaaaatccttcacaagcggggcgtcctctagt
ggcacaaaacctgatccagaccctattagttcaactcaatttggaggcatctttggcgat
tacaacactggaaaccatatctatgagttcatgagttccatcaccggtccaaggtcctcc
attttcagaccctttggtggagctccacatgagcatgactatggatatagtgctactaag
ctcaactttggtgaacaatctctgagacacagaagcccaagtttctccaacctggaacaa
gctagtaaaatgcagcagaatcttggggttaggtttggaggagccgatcaagggctaaca
agagactttcttggtgttggacctgctggagagcttgtgagaagcatgagtggaggaggg
tttgggcagagggagcatggagtggagattaagccattggattcagagagaaagactgct
cccgaaagccctccttttgggggaggggtgaattttcgttga
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