Coffea arabica (coffee): 113716666
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Entry
113716666 CDS
T11342
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
carb Coffea arabica (coffee)
Pathway
carb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113716666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113716666
Membrane trafficking [BR:
carb04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
113716666
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Motif
Other DBs
NCBI-GeneID:
113716666
NCBI-ProteinID:
XP_027096862
UniProt:
A0A6P6V4M1
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All DBs
Position
11c:41746652..41754940
Genome browser
AA seq
1448 aa
AA seq
DB search
MGRLRLQSNINAIEEEPEDCETTSSNKAALACMVNSEIGAVLAVMRRNVRWGGRYVSGDD
QLEHSLIQSLKTLRKQIFVWQHQWQTINPVLYLQPFLEVIRSDETGAPITGVALSSVYKI
LTLDVLDLSTVNIEEAMNLVVDAVTSCRFEITDPASEEVVLMKILQVLLACMKGKTSVVL
SNQHVCTIVNTCFRVVHQAGTKGELLQRIARHTMHELIRCIFSHLPDVDNTECSLVKGGT
PIKHEVGGIDADYSFGSKSENGSEYNGQLGNVASDISTGLNVMGNSAGKTDSGKDSVPYD
SHLMTEPYGVPCMVEIFHFLCSLLNVVEHMGMGPKANSIAFDEDVPLFALGLINSAIELG
GPAITHHPRLLSLVEDELFRNLMQFGLSTSSLILSMVCSIVLNLYQHLRTELKLQLEAFF
SCVILRLSQSRYGASYQQQEVAMEALVDFCRQKTFMVEMYANLDCDITCGNVFEELANLL
SKSAFPVNSPLSAMHILALDGLIAVIQGMAERIGNGSFNSEPAPVNLEEYTPFWMLKCEN
YNEPDKWVPFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPEKLDPQSVACFFRY
TAGLDKNLVGDFLGNHDEFCVQVLHEFAKTFDFQDMNLDIALRLFLETFRLPGESQKIQR
VLEAFSERYYEQSPQILANKDAALLLSYSLIMLNTDQHNVQVKKKMTEEDFIRNNRHING
GNDLPREFLSELYHSICKNEIRTTPEQGAGFAEMTPSRWIDLMHKSKKSAPYIVSDSRAY
LDHDMFAIMSGPTIAAISVVFDHAEHEEVYQTCIDGFLAVAKISACHHLEDVLDDLVVSL
CKFTTLLNPSSVEEPVLAFGDDCKARMATVTVFTIANRYGDFIRTGWRNILDCILRLHKL
GLLPARVASDAADDSEMSPEPGQGKPLTNSLSSVQVQAIGTPRRSSGLMGRFSQLLSLDT
EEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLLAESLLQLARALIWAAGRPQKGS
SSPEDEDTAVFCLELLIAITLNNRDRIGLLWQGVYEHIANIVQSTVMPSALVEKAVFGLL
RICQRLLPYKENLADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANATHIRSQLGW
RTIASLLSITARHPEASESGFDALLFIMSDGAHLTPANYVLCIDAARQFAESRVGQADRS
VRAIDLMAGSVACLTRWDEDAKGAMAEAEALKLSQEIGEMWLRLAQALRKVCLDQREEVR
NHALLSLQTCLTGVEGIHLPHALWLQCFDMVIFTMLDDLTEIAQGHSQKDYRNMEGTLVL
ALKLLTKVFLLLLHELSQLTTFCKLWLGVLSRMEKYMKVKVRGKKSEKLQELVPELLKST
LLVMKTKGVLVQRSALGGDSLWELTWLHVNNIVPSLQSELFPGNELEQSDSKLGEMGKNT
LPNETGSA
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcttaaggctacaatcaaatatcaatgcaatcgaagaggaacctgaagactgt
gagactacttcttccaataaagctgctttagcatgtatggttaattcagaaataggagct
gtcttggcagtcatgaggaggaatgttaggtggggaggtcgctatgtttcaggagatgat
cagctggagcactctcttatccagtctctcaagacattgaggaaacaaatatttgtatgg
cagcatcagtggcaaacaattaatccagtcctgtatctccagccttttctagaggtgatt
cgatctgatgagaccggtgctccaatcacaggtgttgcattgtcatcggtttacaagatt
ttgactcttgatgtgcttgatttaagtacagtcaacattgaagaagccatgaacttggta
gttgatgctgtgactagctgcagatttgagataactgatcctgcatctgaagaagttgta
ttgatgaagatacttcaggttcttttggcttgcatgaaagggaaaacatctgttgttcta
agtaatcagcatgtctgcactattgtcaacacatgcttccgagttgttcatcaagctgga
acaaaaggtgaactattacaacggatagctcgccacacaatgcatgaacttatcaggtgt
atcttttcacaccttccagatgttgacaacacagaatgttctctagttaaaggaggcact
cctattaagcatgaggtcggtggaattgatgcagactacagctttggtagcaaatcagag
aatggtagtgagtacaatggccaacttggaaatgttgcttctgatatttcaactggtctc
aatgtgatgggcaatagtgctgggaagacggatagtggaaaggattctgttccttatgat
tcgcatctgatgactgaaccttacggtgttccctgcatggttgagatatttcacttccta
tgttcattgttgaatgttgttgaacatatgggaatgggccctaaagcaaattctatagct
tttgatgaagatgtacctctttttgccttaggtttgatcaattcagctattgaattgggt
ggccctgcaattacacatcatcctagattgttgagtttggtagaggacgaactatttcgt
aacctaatgcagtttggcttgtcaacgagctcactaattctttccatggtctgcagtatt
gttctcaatctctatcagcacttgcgtactgaacttaagttacaacttgaggctttcttt
tcctgtgtgatattaaggctctcgcaaagccgttatggggcttcatatcagcaacaggag
gtagcgatggaggctcttgttgatttttgtaggcaaaaaacattcatggtagagatgtat
gcaaatttagactgtgatattacttgcggcaatgtgtttgaagaacttgcgaatttgctg
tccaagagtgcatttcctgtgaatagtcctttgtctgcaatgcatatccttgccttggat
ggtttgattgctgttattcaggggatggctgagaggataggaaatggatcgtttaattca
gaacctgctcctgtaaatcttgaggaatatactccattctggatgctgaagtgtgagaac
tataatgaacccgacaagtgggttccctttgttcgtcggaggaaatacatcaaaagacgt
ttgatgattggtgctgatcacttcaacagggatccaaagaaaggattagaatttcttcag
ggcacacatctgttgcctgaaaaacttgacccccaaagcgtggcttgttttttcaggtat
actgctggtttagataaaaatcttgttggagattttctggggaatcatgatgagttttgt
gttcaggttcttcatgaatttgctaaaacatttgatttccaagatatgaacctagatatc
gcgttgcgtttatttttggagacttttcgactgcctggagaatcgcaaaagatacaaagg
gtgcttgaggcattttcagagagatactatgagcaatcaccgcagattttagctaataaa
gatgctgctctcttgctttcttattcattaataatgctcaacactgaccagcataacgtc
caggtgaagaaaaagatgacagaagaggatttcattcgaaacaatcggcacattaatgga
ggtaatgatcttcctcgtgaatttctctctgagctgtatcattctatctgcaagaatgaa
atccgcacaacaccagaacaaggtgctggatttgccgaaatgacccccagtcgttggatt
gatctaatgcacaaatccaaaaaaagtgccccttacattgtctctgattctagagcgtac
cttgaccatgacatgtttgcaataatgtctggtcctacaattgctgccatttctgttgtt
tttgatcatgcagaacatgaagaagtttaccaaacgtgtattgatgggtttctggctgtg
gcaaaaatttcagcatgtcatcatcttgaagatgtcttggatgatcttgtagtgtctctc
tgtaagttcacaacattgttaaatccctcatctgttgaggaacctgttctggcctttggt
gatgattgcaaggcacggatggccactgtcacagtgttcactatagcaaacagatatggc
gattttatccgtactggatggagaaacatattggattgcatcttaaggttgcataaactg
gggcttcttcctgctcgtgtggccagtgatgcagctgatgactcagagatgtcccctgag
ccaggacagggaaagcctcttacaaattctttatcttctgttcaagtgcaagccataggt
actcctagaagatcctctggattgatgggccgattcagtcagctcctgtcattagatacg
gaagaaccaaggtctcaacctactgaacaacaacttgctgctcatcaacgcacactccag
actattcaaaaatgtcatattgacagcatattcactgaaagtaaatttctgttggctgag
tctttattacagcttgcacgtgcactcatatgggctgctgggagacctcagaagggtagt
agttctcctgaggacgaggacaccgcagttttttgtttggagttgcttattgcaattacc
ctgaataatagagaccgaattggactcctctggcagggtgtctatgagcacatagctaac
attgttcagtcaactgtaatgccatccgccctggttgagaaggctgtctttgggctcctc
cgtatttgtcagaggctgctcccatataaagagaacttggctgatgaacttttgagatca
ctccaactggttctcaaacttgatgcgagggttgcagatgcatactgtgagcaaataacc
caggaagttagtcgtctggtgaaggcaaatgctactcacatcagatcacaactgggatgg
cgaactattgcatcgttactttctattacagctagacaccctgaagcttctgaatcaggg
tttgatgccctgttgtttattatgtcagatggagcccacttaactccagcgaattatgtt
ctttgtatagatgcagcaaggcagtttgccgagtctcgagttggacaggctgatagatct
gttcgcgcgatagaccttatggcaggttctgttgcttgtttaacacggtgggatgaagat
gccaagggagctatggctgaggcagaagccttgaaactgtcacaggagataggagagatg
tggctgaggcttgcccaggcattaagaaaagtatgtctggatcagagagaggaggtgaga
aaccatgcacttttatcactgcaaacgtgcttgacaggagtggaggggattcatcttccg
catgctttatggttgcagtgttttgatatggtcatattcactatgcttgatgacttgact
gaaatagcacagggacattcccagaaagactacagaaacatggaaggaacactcgtcctt
gccctgaaactcttgactaaagtgtttttgctattgcttcatgagctgtcacagttgacg
accttctgcaaattgtggttgggggtgcttagtcggatggaaaagtatatgaaggtgaaa
gtcagagggaaaaaaagtgaaaagcttcaggaattggtaccagagctactgaagagtacc
ttgcttgtcatgaagacaaagggggtgcttgtacagaggagcgctcttggaggagacagc
ttgtgggagctaacatggttgcacgtgaataatatcgttccttctctgcaatccgaattg
ttccctggtaatgaattagagcagtccgacagtaaactcggtgaaatgggtaaaaataca
ttgccaaacgaaactggttctgcttaa
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