Coffea arabica (coffee): 113716908
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Entry
113716908 CDS
T11342
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113716908
Enzymes [BR:
carb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113716908
Spliceosome [BR:
carb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113716908
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GFIT
Other DBs
NCBI-GeneID:
113716908
NCBI-ProteinID:
XP_027097261
UniProt:
A0A6P6V3L3
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Position
11c:complement(42903442..42912349)
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AA seq
1174 aa
AA seq
DB search
MPAPCCIFSPPLLSLTTPKSSPFLPYQTLPHFRAFNFCSPKTLHTSKNPLKFGKTFYKLP
KSIFPAESQVSDEEDEDEGEEQLEEDDNEYADDDEDIAADEYDGVRHEVSEEEEEEEIES
FSVVAESKESKHEEFKWQRIARICNEVKVFGDEILDVDELASIYSFRIDKFQRSAIQAFL
RGSSVVVSAPTSSGKTLIAEAAAVATVAKERRLFYTTPLKALSNQKFREFREAFGDSNIG
LITGDSAINKDAQVVIMTTEILRNMLYQSVGVVSSESGLLHVDVIVLDEVHYLSDISRGT
VWEEIVIYCPKEVQLICLSATVANPDELAGWINQIHGKTELVTSSKRPVPLTWHFSTKTA
LLPLLNEKGTGMNRRLSLNRMEPDSSGTDFSKDERPRRRNSRKHENDVTTLSKNGVNTTR
RSQVPQVVDTLWQLKGWDMLPAIWFIFSRKGCDAAVQYLEDCKLLDECEISEVELALKKF
RVQYPDAVRESSVKGLLRGAAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMP
ARTAVISCLSKRGESGRIQLSSNDLMQMAGRAGRRGIDDRGHAVLVQTPYEGPEEGFKLL
FSGLKPLVSQFTASYGMVLNLLAGTKVRSRMSESDDIKVLQAGRTLEEARKLVEQSFGNY
VGSNVMLAAKEELARIQNDIEMLTAEITDEAIDRKSQKLLSQSAYKEIATLQEELRAEKC
RRTDLQRKMELERLFSLKPLLKELEDGHLPFMCLQYNDTDGVQHLLPAVYLGQLDSLNAS
KLKKMVSSSDSFALSLDRQIYQSGYTGCKHEVALSYHVALGSDNSWYLFTEKWIRTVYRT
GFPNVPLAQGDTLPRVIMSELLDKGDMQWQKLVESELGGLWCMEGSLETWSWSLNVPVSS
SLSQDDEVLKLSQAYYDAVQSYKDQRNRVSRLKKKIARSEGFKEYKKITDFAKFTEEKIR
RLMARSKRLTNRIKQIEPSGWKEFLQVSNVIHEARALDINTHVIFPLGETAAAIRGENEL
WLAMVLRNKILLDLKPAQFAAVCGSLVSEGIKIRPWKNNSYIYEASSTVTNVIEFLADQR
SSLLELQEKHGVMIPCCLDSQFSGMVEAWASGLTWREIMMDCAMDEGDLARLLRRTIDLL
AQIPKLPDIDPLLQSNAKGASDIMDRPPISELAG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcaccctgctgcatcttctcccctccccttctctcactcaccacaccgaagtcc
tccccatttctaccctaccagactctcccccatttccgagccttcaatttctgctcgccc
aagactcttcacacctcaaaaaaccctctcaaattcggcaaaaccttttataaactccct
aaatcaattttccctgccgagtctcaagtctccgacgaagaagacgaagacgaaggcgaa
gagcaactagaggaggatgataatgaatatgcggacgacgatgaagatattgcggctgat
gaatacgacggcgtgcgacacgaggtgagcgaagaagaggaagaagaggaaattgagagt
ttttccgtggtggccgagagtaaggagtccaagcatgaggaattcaagtggcagagaatc
gcgaggatttgtaacgaagttaaagtgttcggcgatgaaattctcgatgttgatgagctc
gcttccatttactctttcagaattgataaatttcagcgatcggcaattcaagcattcctg
agaggatcatcagtggtggtttctgcaccaaccagtagtgggaaaactctaatagcagaa
gctgcagcagttgccacagtagccaaagaaagaagattgttctacacaactcccttaaag
gctctatctaatcagaaattccgtgaattccgtgaagcatttggtgatagtaatattggg
ctcattactggagattcagctattaacaaagatgcccaagttgtaattatgactacagag
attttgcgcaacatgctgtatcagagtgtaggagttgtttcatctgaaagtggacttctc
catgttgatgtgattgttctggatgaagtgcattatttgagtgacatatctcggggtaca
gtttgggaagagattgttatatattgcccaaaagaagtgcaactcatatgcctctcagca
actgttgctaatccagatgaactggctggttggattaatcagattcatggtaaaaccgag
ttggtgacgtcatccaagcgtccagttcctttgacttggcacttctcaacaaagacagct
ttgctacctcttcttaatgagaaaggcactggcatgaataggaggctctcactaaatcgc
atggaacctgattcttctggaactgatttctccaaggatgaaaggcccaggagaaggaac
tcaagaaaacatgaaaatgatgtaactacactttcaaagaatggtgtaaacaccactcgc
cgctcacaagtccctcaagttgtagacacgttatggcagcttaagggatgggatatgctt
cctgcaatttggtttatctttagcaggaaaggatgtgatgcagcggtgcagtatcttgaa
gactgcaagttacttgatgagtgtgagatcagtgaagttgaactggcactgaagaagttt
cgtgttcaatatcctgatgctgtcagagaatcttccgtgaaaggtcttctccgaggggct
gcagctcatcatgctggctgccttcccttatggaaatctttcatagaggagctgtttcaa
agagggctagttaaggttgtttttgccacggaaacacttgctgctgggattaacatgcca
gcgaggacagctgtaatttcgtgtcttagcaaaaggggtgaaagtggacgtatccagtta
agctcaaatgacttgatgcaaatggctggccgtgctggtcgtaggggcattgatgataga
ggtcatgcagttcttgttcaaacgccatatgaaggccctgaagagggcttcaagcttctt
ttttctggcctcaagcctcttgtatcacagtttactgcttcttatggaatggttctgaat
cttctagcgggtacaaaagttagaagtagaatgagtgaatcagatgacataaaagtctta
caagcaggccggactttagaagaagcgaggaagttagtcgagcagagttttggaaattat
gttgggagcaatgttatgcttgctgccaaagaagaacttgctaggatacaaaatgatata
gagatgctgactgcagaaattactgatgaagctattgataggaaaagccagaaactgttg
tctcaatcagcatataaagagattgccaccctccaggaagaactaagggcagaaaaatgt
aggcggactgatctacaaagaaaaatggaattggagagactcttttctttgaaacctctg
ttgaaggagcttgaagatgggcacttaccctttatgtgcttacagtataatgatactgat
ggggttcaacatctgcttcctgctgtctatctggggcagcttgattctctgaatgcttcc
aaacttaaaaaaatggtcagcagttcagattcttttgcactaagtttagacagacaaatt
tatcaatcaggttatactggatgcaaacatgaagttgcactatcttatcatgtggctctt
ggttcggataattcttggtatcttttcacggaaaagtggataagaacagtttacaggact
ggctttcctaatgttcccctggctcaaggtgatactttgcctcgggtaatcatgtcagaa
cttcttgacaagggggacatgcagtggcagaagcttgtcgaatctgagcttgggggtttg
tggtgcatggaaggatctcttgagacgtggtcttggagtttaaacgtgccagtctcaagt
agtctttcacaagatgatgaggtactaaaactatctcaagcatactatgatgcagtacaa
agctacaaggatcagagaaatagagtctcccgtttaaagaaaaaaattgcacgtagcgaa
ggctttaaagaatataagaagataactgattttgccaagtttactgaagaaaagattcga
cgtttaatggccagatcaaagcgtctgactaacagaatcaagcagattgaaccttctggt
tggaaggaatttctgcaggtcagcaatgtcatacatgaagctagggccttggatataaac
acacacgtcatattccccctgggtgaaactgcagctgcaattcggggagaaaatgaactc
tggcttgctatggttcttcgaaacaagatattgctggatctaaaacctgcacagtttgct
gctgtctgtggaagcctagtttctgaagggattaagatcaggccctggaaaaataacagc
tatatatatgaagcttcctccactgtgaccaacgtaatcgaatttttggcagatcaaaga
agctcactcttagaacttcaggaaaagcatggagtaatgataccttgctgcttggatagc
caattttctggtatggttgaagcctgggcttctggtctaacttggagagagattatgatg
gattgtgcgatggatgaaggtgatctagctcgtctcttacgtcgaacaattgatttatta
gcacagattcccaagttgcctgacattgacccactactgcaaagcaacgccaagggtgca
tctgatatcatggaccgtcccccaataagtgagctggcggggtga
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integrated database retrieval system
