Coffea arabica (coffee): 113716980
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Entry
113716980 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG5-like isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113716980
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113716980
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113716980
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4_2
zf-C3HC4
zf-RING_2
Prok-RING_4
Ferritin-like
IBR_2
Motif
Other DBs
NCBI-GeneID:
113716980
NCBI-ProteinID:
XP_027097370
UniProt:
A0A6P6V3T0
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Position
11e:61201819..61206127
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AA seq
431 aa
AA seq
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MGSASSSRRNISSFSSSSSSHAGYQRSPYPQQPPYYTPQPHHAPASFNYGARTPQPYQKS
DSRYSRIADNYETLDQVTAALSEAGLESSNLIVGIDVTKSNEWTGARSFKHKSLHHMGNV
QNPYEQAISIIGKTLSAFDEDNLIPCFGFGDASTHDQDVFSFYPDARSCNGFEEVLGRYR
ELVPRLRLSGPTSFAPIIEMAMRIVEDSVGQYHVLLIIADGQVTRSTETPRGQLSQQEQK
TVDAIVRASDYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSKDVDPLR
KQAEFALAALMEIPSQYKATIELDMLGCETKKAPGRRPLPPPIYGSSLKSCRPNSFQRSA
QSYPYPFPEIAAQKAPSSSSLPDNKVCTICLGSTKDLAFECGHQACYNCGIDLQSCPICQ
MPITIKIKLYS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgcaagttcgagtaggagaaacatttcgtccttcagctcatcttcttctagt
catgctggttaccaaagatcaccgtaccctcaacagcctccgtattatacccctcagcct
caccatgcacctgcttccttcaactatggtgcccggactcctcagccatatcagaagtca
gatagcaggtattcgaggatagccgataactatgaaaccttagaccaggtaacagctgct
ctgtccgaggcaggattagagtcatctaaccttatagttggtattgatgtcacaaagagc
aatgagtggacaggtgcaaggtcattcaagcacaaaagcttacatcatatgggaaatgtt
cagaatccctatgagcaggcaatttccatcattgggaaaaccttatctgcctttgatgag
gacaacttgattccatgtttcggatttggagatgcctcaacacatgatcaagatgtattt
agtttctatccagatgctagatcttgtaatggatttgaagaagtgcttgggagatacagg
gaattagttccccgtctaagactttcaggaccaacatcttttgcacctatcattgaaatg
gctatgagaatcgtagaggacagtgttggccagtaccatgttttgctaataattgctgat
ggacaagtgacaagaagtactgagactcctcgtggtcaacttagtcaacaggagcagaag
acagttgatgccattgtcagagcaagtgactatccattatcaataattctagttggggtt
ggagacggtccttgggacatgatgagggagtttgatgataatatccctgcaagagcattt
gataattttcagtttgtcaattttacggagattatgtcaaaggatgtggatccattgaga
aaacaagcagaatttgctcttgctgccttgatggaaataccttctcagtacaaagctaca
attgaactcgacatgttgggatgcgaaacaaagaaggctccaggcaggagacctcttcct
cctcctatttatggcagcagcttgaaatcatgtcgtccgaacagtttccagcgtagtgct
caatcttatccttatccttttcctgagattgctgctcaaaaggctccatcatcaagctct
cttccggataacaaggtctgcaccatttgtctaggcagtactaaggacttggcatttgaa
tgtgggcatcaggcttgctataactgtggaatagatcttcagtcatgcccaatatgccag
atgccaataacaatcaaaatcaagctctattcttag
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