Coffea arabica (coffee): 113717145
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Entry
113717145 CDS
T11342
Name
(RefSeq) transcription and mRNA export factor ENY2-like isoform X1
KO
K11368
enhancer of yellow 2 transcription factor
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113717145
03019 Messenger RNA biogenesis [BR:
carb03019
]
113717145
03036 Chromosome and associated proteins [BR:
carb03036
]
113717145
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
113717145
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
113717145
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
113717145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EnY2
DUF5787
VRR_NUC
PCP_red
AAA_lid_2
Motif
Other DBs
NCBI-GeneID:
113717145
NCBI-ProteinID:
XP_027097611
UniProt:
A0A6P6V4N1
LinkDB
All DBs
Position
11c:44885379..44889039
Genome browser
AA seq
129 aa
AA seq
DB search
MRSSVKRPPTPDAEEEEQDREPTLQEIINIKLVESGEKERLKELLRERLVECGWKDEMKT
LCRAFARKRGRNNVTVDDLVHVITPKGRGNYCVLCLRNLHWTVLGHEIFKGPNLTLAVVQ
ISNPSAATL
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcttcagttaaacgtccaccaactccagatgcagaagaagaggagcaagatcga
gaacctactcttcaagaaattattaatatcaagctagtagagagtggagaaaaagaaaga
ttgaaggagcttttgagggaaaggcttgtagaatgtggttggaaggatgaaatgaaaact
ctttgcagggcttttgcaaggaagagaggaaggaataatgtaactgtggatgatcttgtt
cacgtcataaccccaaagggaagaggcaactactgtgtcctttgtttaaggaacctccac
tggactgtgcttgggcatgagatatttaaaggacccaatttgaccctggcagtagtacaa
atatctaatccatctgctgcaactctctag
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