Coffea arabica (coffee): 113717199
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Entry
113717199 CDS
T11342
Name
(RefSeq) protein CHROMATIN REMODELING 19-like
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113717199
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113717199
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
113717199
NCBI-ProteinID:
XP_027097701
UniProt:
A0A6P6V4X0
LinkDB
All DBs
Position
11c
Genome browser
AA seq
758 aa
AA seq
DB search
MTRRSIDDLELSSDEEVWSKHSFKFSRVINSDDATSSKPQPRAAPPPIESFAYSNNSGNN
LSSCDLIEIVESSSEENGCENLEDDDVDLEVSNRSRKSVKTSTSSRGRRFVIDDDEEEEE
EKIVSNSKENDELSDFFEEEEEENDVIKKALQKCGKISAELRRELYGTTAAACDTFSEIE
ENSSLRIVTQDDVAEACGGGDSEFQPVLKPYQLVGVNFLLLLYRKKIGGAILADEMGLGK
TIQAITYLTLLKHLEGDSGPHLIVCPASVLENWERELKKWCPSFNVLQYHGAARSAYSKE
LSYVSKAGLPPPFNVILVCYSIFERHSAQQKDDRKILKHWRWSCVLMDEAHALKDKNSFR
WKNLMSVARKAKQRLMLTGTPLQNDLHELWSMLEFMMPDLFATGDVDLRKLLNAEDRDLI
AQIKSILGPFILRRLKSDVMQQLVPKTQKVEYVKMEKLQADAYTEAIDNYRAISQARISK
LAKIDLNSVARILPRRQISNYFLEFRKIANHPLLVRRIYTDDDVVRFAKALHPKGVFGFE
CTLDRVIEELKNYSDFSIHQLLLYHGDADGEGVLSDEHVMASAKCQALAELLPILQHEGH
RVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTERQTIVDTFNKDSSIFVCLLSTRA
GGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTVYRLVTKDTVDENVFEIA
NRKLTLDAAVLQSGVEVEDEGMVPDKTMGEILSSLLLG
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgacggagcatcgatgatttggaactgagctccgacgaggaggtatggtccaaa
cactcgttcaaattctcgcgagtcatcaattcagatgatgcgacgtcgtcgaagccacag
ccaagggcagcgcctcctccgattgaatcgttcgcctattctaataattcgggaaataat
ttaagtagctgtgatttgattgagatagtggagtcttcttctgaagaaaatggttgtgag
aatttggaggatgatgacgtggaccttgaggtgagtaacagaagtaggaaaagtgtgaaa
acttcaaccagcagtcgcggccgtcgatttgtgatcgatgatgatgaagaagaagaagag
gaaaaaattgttagtaatagtaaggaaaatgatgaattgagtgatttttttgaggaggag
gaggaggaaaatgacgtcatcaagaaggcgttgcagaagtgtgggaagatttcagctgag
ctgagaagagagttgtacggtacaaccgctgctgcgtgtgatactttctctgaaattgag
gagaattcttcacttagaatcgtcactcaggatgacgtggcggaggcgtgtggtggcgga
gactccgaatttcagccagtgctaaaaccttaccaattggttggggtcaattttcttctt
cttttgtacagaaagaaaattgggggagctattttggcagatgagatgggtcttggtaag
accattcaggctattacatatctaacattgctgaagcacctggaaggtgattctggtcct
cacctgattgtttgtcctgcttcggttcttgagaactgggaaagggagcttaaaaaatgg
tgtccatcctttaatgtgctccaatatcatggtgcagctcggtcagcttattcaaaggaa
ttgagctatgtttcaaaggcgggattgcctcctccttttaatgttattcttgtgtgttac
tccatttttgaacgacacagtgcacagcagaaagatgatcgcaaaattttgaaacattgg
cgctggagttgtgtgctaatggatgaagctcatgcactgaaggataaaaatagctttaga
tggaaaaatttgatgtctgttgcacggaaagcaaagcagcgtttgatgcttactgggacg
ccactacaaaatgacctgcatgagttatggtcaatgttggagtttatgatgcctgatctc
tttgctactggagatgttgacttgaggaagcttctgaatgcagaagatagagacttgatt
gctcaaataaagtctatcttgggtccatttatattgagaagattaaaatccgatgtaatg
cagcaactagtcccgaagacccaaaaggttgagtatgtgaagatggaaaagctacaagca
gatgcttacacagaagcaattgacaattatcgggcaatttctcaagctcgtatttcaaag
ttagcaaaaatcgatttaaatagtgttgctagaattttgcctcgaagacaaatttcaaac
tactttcttgaatttcgtaagattgcaaatcatccactattggtgaggcgcatttacaca
gatgatgatgttgttcggtttgctaaagctttgcatccaaaaggtgtatttggctttgaa
tgtaccttggaccgagtgattgaggagcttaagaattacagtgacttctcaattcatcag
cttttgctctatcatggagatgcagatggcgagggagttctctcagatgagcatgtaatg
gcctctgcaaagtgtcaggcattagccgaactcctccccattctacagcatgaagggcat
cgtgttctaatttttagccaatggacatcgatgcttgatattttggagtggaccttggat
gttattggggtcacgtacaggcgtcttgatggaagcactcaggtgacagaaaggcaaaca
atagttgataccttcaataaggactcttctatatttgtgtgcttgctgtcaacacgagca
ggaggacagggtttaaacttgactggagctgacacagtcataatacatgacatggatttt
aatccacagatagatcgacaagctgaagatcgttgtcatcgcattggacaaacaaaaccg
gttacagtatataggttagtgacaaaggatactgttgatgaaaacgtgtttgagattgca
aatcggaagttaacgctagatgctgctgtattacagtctggggtagaagttgaggatgaa
ggtatggtgcccgataagacaatgggagagattttatcatccctgttgcttggctaa
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