Coffea arabica (coffee): 113717240
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Entry
113717240 CDS
T11342
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113717240
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113717240
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113717240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_16
zf-ANAPC11
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-C3HC4_3
zf-RING_Vps41
zf-C3H2C3
zinc_ribbon_16
PHD_NSD
VPS18_RING_C
Prok-RING_4
zf-HC5HC2H_2
PHD
zf-Nse
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
113717240
NCBI-ProteinID:
XP_027097761
UniProt:
A0A6P6V525
LinkDB
All DBs
Position
11c:25182726..25189539
Genome browser
AA seq
302 aa
AA seq
DB search
MEDRKSENNSINQEENPSTIPVNNSAGNSNNNDTERGGGGRRQRTPFTDLSQEDADLALA
RTLQEQERAYMMLRMNVGEGSDYGSWEGGSYGHVDDEDDDFDDPSEEEYDGSEVEEDENE
EEEDAFDVNAQDEEEEDDSQNVEIDPSAYSSDEAYARALQDAEEREMAARLLSMAGINEM
VIGEADDEEEDDGNSQDAWEEVDPDELSYEELLALGEVVGTESRGLSADTIASLPAMSYK
SQCTEAGSTDSCVICRLDYEEGDRLTVLSCKHSYHPDCINNWLKINKVCPVCSAEVSTSG
NS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcgtaaatccgaaaataattccatcaaccaagaagaaaaccctagcactatt
ccagttaataattctgctggtaacagtaacaataacgatacagaacgaggcggcggtggc
cgccggcagagaacgccgttcaccgacctcagtcaagaagacgccgatcttgccctagcc
cggactcttcaagaacaggagagagcttatatgatgttaagaatgaatgttggtgaggga
agtgattatggaagttgggaaggtgggagctacgggcatgtagatgacgaggatgatgat
tttgatgatcccagcgaagaagaatatgatggcagtgaagtagaagaggatgaaaatgag
gaagaagaagatgcatttgatgttaatgcacaggatgaggaagaggaggatgacagccag
aatgttgaaattgatccatctgcttattcaagtgatgaagcctatgctcgagcattgcaa
gatgcggaagaaagggaaatggctgctagattgctgtccatggctggaataaatgaaatg
gttattggtgaagctgatgatgaagaagaagatgatggtaattctcaggatgcatgggaa
gaagttgatcctgatgagctatcatatgaggaattgcttgccttgggtgaggttgttggg
actgagagtaggggtctttctgccgacacaattgcctctttgccagcaatgagctataag
tctcagtgcacagaggctggaagcactgattcgtgtgtaatttgtaggttggactatgag
gaaggtgacagattgacagtgctttcttgcaagcattcttaccacccggattgtataaac
aattggttaaagataaataaggtttgtccggtctgcagcgctgaggtctccacttcggga
aacagctag
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