Coffea arabica (coffee): 113717326
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Entry
113717326 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113717326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113717326
03032 DNA replication proteins [BR:
carb03032
]
113717326
Spliceosome [BR:
carb03041
]
Complex A
U1 snRNP components
Sm proteins
113717326
U2 snRNP components
113717326
Complex B
U1 snRNP components
113717326
U4/U6.U5 tri-snRNP components
113717326
Complex C
U2 snRNP components
113717326
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113717326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
113717326
NCBI-ProteinID:
XP_027097922
UniProt:
A0A6P6V7N6
LinkDB
All DBs
Position
11c:35516070..35519685
Genome browser
AA seq
107 aa
AA seq
DB search
MSRPMEEDGAKNEEEEFTTGPLSILMLSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVL
ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcccaatggaagaggatggtgcgaagaatgaggaagaagaatttacaactggg
cctctatctattttgatgttgagtgtcaaaaataacactcaggtgctcattaactgtcgg
aacaacagaaagcttcttggtcgtgtgcgtgcctttgacaggcactgcaatatggttctg
gaaaatgttagagagatgtggactgaggtgcccaagacagggaaaggcaagaaaaaagct
cttccagttaacaaggacaggttcattagtaaaatgttccttcgcggggattctgtaatc
attgttctgcgtaatcccaagtaa
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integrated database retrieval system