Coffea arabica (coffee): 113717768
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Entry
113717768 CDS
T11342
Name
(RefSeq) TATA-binding protein-associated factor BTAF1 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113717768
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
113717768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_ECM29
HEAT_GCN1_C
HEAT_GCN1
HEAT_EZ
TPR_Trm732_C
HEAT_MROH2B_C
HEAT_2
HEAT_GCN1_C_2
ARM_TBCD_2nd
TPR_TNPO3_IPO13_3rd
TAF6_C
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
113717768
NCBI-ProteinID:
XP_027098373
UniProt:
A0A6P6V683
LinkDB
All DBs
Position
11e:14416320..14445573
Genome browser
AA seq
2052 aa
AA seq
DB search
MAQQQSSRLHRLLTLLDTGSTQATRFTAAKQIGEIAKSHPQDLIPLLSKVSQYLCSKRWD
TRVAAAHAIGAIAENVKHTSLTDINSCLEMKMSKLGVSCPVGDVLAWAYCYPKFVANASF
RSFDLNKVLEFGALLASGGQEYDIGSESGKNPRERLARQKQNLRRRLGLDVCEQFMDVGD
MIRDEDLLVQKFHSAGNGLAPQYRSMSNFQQFVANMVPGVKSRRPSARELNLLKRKAKIS
SKDQSKAWSKDGNAEVQPQELDMASPKGPYRDILSLNKQFADAVSDDDNFDSDGDGGWPF
QSFVEQLLVDMFDPVWEVRHGSVMALREILTHQGASAGVIMNDLNFDSALSSSFNDMGEE
NTTKRERQIDLNMQILFEESQPVLKRPKLEGASSQLTDTIVDSTKDDNLGIHVKVEAPGW
DLPMGHANGEVVSSDKVEVGHQSHLSSASDPNSYMSSAKICSEDKGSMEKADLFKDLPNS
PELLNLLKVARHSWVTNCEFLQHCTIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGAV
LKYMHPSLVHETLNILLQMQRRPEWEIRHGSLLGIKYLVAVRQEMLSDLLGLVLPACTAG
LEDPDDDVRAVAADALLPAAAAIVFLKGQTLHSILMLLWDILLDLDDLSPSTSSVMNLLA
EIYTQEHMNPKSLGTVTSCEKQEFDLNKIGRLDDLGEEINYLENPYMLSTLAPRLWPFMR
HSITSVRHSAIRTLERLLEAGFKKSIAESSCSFWPSFILGDTLRIVFQNLLLESNEEILL
CTERVWKLLLQCPVEDLVGVVELYFSSWIELATTPYGSPLDATKMFWPVALPRKSHFRAA
AKMRAVRLENDSYKNTRLDVPDSAISQDKVGDPSFSSPAKIVVGADEDISVTHTRVVTAT
ALGILASKLHVTTLGFVIDPLWKALNSKSGVQRQVAAMVLISWFQELKMKDVSVSSEVGP
SALIGFRNWLLDLLGCTNPAFPTKDTLLPYAELSRTYAKMRNEASQLHRITEASGMFHDL
LASTKLDLENLTADDAINFASKLPSPSSAEAYTERDAFDELESLKQRLLTTSGYLKCVQG
NLHITVSALLAGAVVWMSELPARLNPVILPLMASIKREQEEVLQSKAAEALAELISGCIS
RKPGPNDKLIKNLCGLACSDPCETPQAAVLSSIEIVEEQEFLSSGSTCSRQKSKVHILAP
GEDRSKAEGFISRRGSELALKYLCQKFGGSLFDKLPKLWDCLVEVLKPGNLDGLTPEEEK
FIDEAIDSVADSQVLINNIQVVRSLAPMLDWTLRPKLLTLLPCIFKCVRHSHVAVRLAAS
RCVMTMAKSMTSDVMGSVIEHVIPMLSDMSSVHARQGAGMLVSLLVQGLGVELVPYAPLL
VVPLLRCMSDIDHSVRQSVTHSFAALVPLLPLARGVPLPSGLSERLSRSKEDAQFLEQLV
DNSHIDDYKLSTELRVNLRRYQQEGINWLAFLKRFNLHGVLCDDMGLGKTLQASAIVASD
IAEHSHANKTEQLPPSVIICPSTLVAHWVYEIEKFIDTSLLTTLQYIGSAQDRISLRSEF
DNHNIIVTSYDVVRKDIDYLGQVFWNYCILDEGHIIKNSKSKVTATVKQLKAQHRLILSG
TPIQNNVLDLWSLFDFLMPGFLGTERQFQATYGKPLLAARDPKCSSKDAEAGALAMEALH
KQVMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPLQLRLYERFSGSHVKQEISSIVKLNEL
DAGEGNPSTKTSSHVFQALQYLLKLCSHPLLVVGEKVPETVSTVLSDLFPGKADYISELH
NLQHSPKLIALQEILEECGIGIEASSSEGSIAVGQHRVLIFAQHKAFLDLIERDLFHGHM
KNVTYLRLDGSVEPEKRFEIVKAFNSDPTIDALLLTTHVGGLGLNLTSADTLVFMEHDWN
PMRDHQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINADNASLKTM
NTDQLLDLFTPAENGKGPRISRTSTENLDGETKLPGSSRGLKKILGGLEELWDQSQYTEE
YDLSQFLAKLNG
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaacaatcatcacgtcttcaccgtctgcttactttgttggacacgggctcg
acccaagcgacgaggtttactgcagctaagcaaattggggaaattgcaaaatcacatcca
caggacctgatccctctgttgagtaaggtttctcaatatctttgtagcaaaaggtgggat
actagggttgctgctgctcatgccattggagcaattgctgagaatgttaaacacacatct
ttgactgacataaattcatgccttgagatgaagatgtcaaagttgggggtttcttgtcct
gttggcgatgtgctagcgtgggcttactgttaccctaaatttgtagcaaatgcttcattt
agaagttttgatctgaacaaagtattggagtttggagctctattggcatctggggggcag
gagtatgatattgggagtgagagtggcaagaatccaagagagcgattggctcgacagaaa
caaaatctacggcgtcgtctaggtttagacgtatgcgagcagttcatggatgttggtgac
atgataagagatgaagacctgctggtgcaaaagtttcactccgctggcaatggtcttgcc
cctcaatataggtctatgtccaatttccagcaatttgtggcaaacatggtccctggtgtt
aaatctaggaggccaagtgcaagggaactgaatctcctaaaacgcaaagcaaaaataagt
tccaaagaccaatcaaaagcatggtctaaggatggaaatgctgaggtccaaccacaagag
ctggatatggcatcgccaaaaggcccttatcgtgacatcttgagcttgaacaagcagttt
gcagatgctgtttctgatgatgataactttgatagtgatggtgatggcggttggcctttt
caaagttttgttgaacagctcctagttgatatgtttgatcctgtctgggaggtccgtcat
ggaagtgttatggctttgagagaaatattaacccatcagggtgccagtgctggagttatc
atgaatgacctgaactttgatagtgccctgagttctagtttcaatgatatgggtgaagaa
aacacaactaagagggagagacagattgatctgaatatgcaaatcttgtttgaagagtcc
caacctgttttgaagagaccaaagcttgaaggtgcatcatctcaactgacagatacgatt
gttgattccaccaaagatgataatcttggtattcatgtaaaagttgaagcccctggatgg
gatttgcctatggggcatgcaaatggtgaagttgttagttctgataaggtggaggtgggg
catcaatctcaccttagtagtgcatcagatcctaatagttatatgtcaagtgcaaagatc
tgctctgaggataaggggtccatggaaaaagcagatctatttaaagatcttcctaacagt
cctgagctgctgaacttgcttaaagtggctaggcattcttgggttacaaattgtgaattt
cttcaacattgtacaatccgattcttgtgtgtcttgtcactggaccgttttggagactat
gtgtctgatcaggtagttgctcctgttcgggaaacctgtgcacaggctctgggtgctgtc
ctcaagtatatgcacccatcgttagtccatgaaactttaaatatcttgcttcagatgcag
cgtagaccagagtgggaaattcgtcatggaagtcttttgggaataaaatatctggttgct
gtgcgccaggaaatgctaagcgatttgcttggtttggttctccctgcctgtacagctggg
cttgaggatcctgatgatgatgtaagagctgtggctgcagatgccttgctacctgctgca
gctgctattgtttttctaaagggccaaactttgcattccatacttatgctactctgggat
atattgcttgatctggacgacttaagcccatctactagcagtgtcatgaatctcttggca
gagatatatactcaagagcatatgaatccaaagtcacttggaactgtcacatcctgtgaa
aaacaggaatttgatctcaataaaattggtcgcctagatgacttgggagaagaaataaat
tatcttgaaaatccttatatgttatcaacattagcaccaaggttgtggccatttatgaga
cacagcatcacctcagtccgccattcagccattcgaactttggagcgtttgcttgaagct
ggttttaagaagagtattgctgagtcatcttgctcgttttggccttcttttattctaggt
gatacactaaggattgttttccagaacttgctgcttgaatcaaacgaggaaattttgctt
tgcactgagagagtttggaagctcctccttcagtgccccgtggaggacttggttggtgtt
gtagagttgtacttttcttcttggatagagctggcaactactccatatggttcaccactg
gatgccacgaaaatgttttggcctgtagcgcttcctcgtaagagtcatttcagagctgca
gctaagatgagagctgttaggcttgaaaatgactcttataagaacacacgcttggatgtt
ccagacagtgctatttcacaggataaagttggagatccttctttctctagccctgctaag
atagttgttggtgctgatgaagacatttcggtcactcatacacgggttgttacagcaact
gcattgggcattttagcttctaagttgcatgtgacaaccttgggatttgtcattgatcca
ttgtggaaggcactgaactctaaatctggtgttcagcggcaggtggcagcgatggtcctc
atatcttggttccaggagttgaaaatgaaggatgtttctgtgtcttctgaagttggtcct
tcagctttgattggtttcaggaattggttgttagatttgttaggttgcaccaatccagct
ttcccgacaaaggatacacttcttccttatgctgaactttcaagaacatatgctaaaatg
cggaatgaggcttctcaactacaccgtatcactgaggcatctggcatgtttcatgatctg
ttggcttcaaccaagttggatctagaaaatttgactgcagatgatgcaattaattttgca
tcaaaactgccttctccatctagtgctgaagcatacactgaaagggatgcttttgacgaa
ctggaatcattaaaacaaagacttttaacaacatcaggatatctgaaatgtgttcagggt
aatttgcacatcactgtctctgctttactagctggggcagttgtctggatgtcagagctt
cctgcaagactcaacccagttatattacctttgatggcttccattaaaagggagcaggag
gaagtgttgcaaagtaaggctgctgaagcccttgctgaacttatttctggttgcatctca
cgcaagcctggacccaatgacaagttaattaaaaacctttgtggtttggcctgttcggat
ccttgtgagacacctcaagctgctgtccttagttccattgagatagttgaagagcaagaa
ttcctgtcttctggaagcacttgcagtagacagaaatcaaaagttcatatacttgcccct
ggtgaagaccgatcaaaggctgagggcttcatcagccgccgtggttcagaactagcactc
aaatatttgtgccagaagtttggtggttcattgtttgacaaactcccaaagctttgggat
tgccttgtggaagtccttaagcctggtaatcttgatgggttgactccagaagaagaaaag
tttattgatgaagctattgattcagttgcagattcacaagtcttgataaataatattcag
gtggttcgatctcttgcaccaatgttggattggacattgagaccaaaactgctcacactt
cttccatgcatatttaaatgtgttcgtcattctcatgttgctgttaggctagctgcgtca
agatgtgtgatgactatggccaaatcaatgacctcagatgtcatgggttctgtaatagaa
catgtcattcctatgttgagtgacatgtcatctgttcatgctagacagggtgctggcatg
cttgttagcttgcttgttcagggacttggtgtggagttggttccttatgctcctttattg
gtggttccactactgaggtgtatgagtgacattgatcattctgtcagacagagtgtaaca
catagttttgctgcccttgtgcctcttcttccacttgcacgtggtgttcccctaccttct
ggccttagtgaacgtttatctagaagtaaagaagatgcacaatttttggagcaactggtt
gacaattctcacattgatgattacaagctctcaactgaactgagagttaatttaaggagg
tatcaacaagaaggcataaattggttggcatttttaaagcgctttaaccttcatggggtt
ttgtgtgatgatatgggccttggtaagaccctccaagcatcagcgattgtggcatctgat
attgcagagcattctcatgcaaacaaaactgagcagcttccaccatcagttataatatgt
ccttcaacactagttgcacactgggtctatgagatagagaagtttattgatacttctcta
ctgactacccttcagtatataggttcagctcaagatcgtatatctctccgttctgaattc
gacaaccataatatcattgtgacatcatatgatgtcgtccgcaaagatattgattatctt
gggcaggttttttggaactactgtattctggatgagggacacatcataaagaattcaaag
tctaaagttacagctactgtgaaacaattgaaggcccagcaccgcctcatactgagtgga
acacccatccagaacaacgttttggacctctggtcactttttgactttctcatgccagga
tttcttggaacagaaagacaatttcaagccacttatgggaaaccgctgctagcagccagg
gatcctaaatgttcttcaaaggatgctgaggcaggtgcactagccatggaagcattacat
aagcaggtcatgccttttctgctacgccgaacaaaagatgaagtcttgtctgatttgcct
gaaaaaataatccaggatagatactgtgacttgagtcctctgcagctaagactttatgaa
cgattctctggttcacacgtaaaacaagaaatctcaagtattgtgaagctgaatgagtta
gatgctggagaaggaaatccttcaaccaaaacatcatcccatgttttccaggcacttcag
tacttgctaaaactttgcagccatccattgcttgttgttggggaaaaggttccagaaaca
gtctcaactgttttgtcggacctcttccctggtaaagctgattacatctctgaacttcat
aatctccaacactctcccaaacttatagccctacaagagattctggaagagtgtggaata
ggaattgaggcttcaagttctgaaggttccattgctgtagggcaacacagggttctgata
tttgcgcagcataaagcttttctggatctaatagagagagatctgttccacggtcatatg
aaaaatgttacatacttgcgacttgatggctctgttgaaccagagaaacgttttgagatt
gtaaaagccttcaactcagaccctactattgatgcgttgctgcttacaacacatgttggt
gggctgggattgaacctgacatcagctgatacccttgtatttatggaacatgactggaat
cccatgcgagatcatcaggcaatggatagggcacacaggctgggacaaaagaaagtagtc
aatgtccatcgtcttatcatgcgaggaacattggaagaaaaagtcatgagcctccaaagg
ttcaaagtctccgttgccaatgcagtcatcaatgcagataatgctagtctcaaaacaatg
aatactgatcagttgcttgacctatttactccagcggagaatggaaagggacctaggata
tcacggacttctactgagaatttggatggtgaaaccaaattaccaggtagcagcagggga
ctcaaaaaaatccttggcggactagaggagctttgggatcagtctcaatatactgaagaa
tatgacctaagccagtttttggcaaagttaaatggctga
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