Coffea arabica (coffee): 113717935
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Entry
113717935 CDS
T11342
Name
(RefSeq) nuclear pore complex protein NUP54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
carb Coffea arabica (coffee)
Pathway
carb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113717935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113717935
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113717935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
113717935
NCBI-ProteinID:
XP_027098583
UniProt:
A0A6P6V9E4
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MFGTPSSAPPFGTPSSTPAFGTPSSTPAFGTPSSTPAFATPSSSPAFGTPSTPSFGTGFG
TSLFSTPFSQQQSQQSSFFQTPQSSSPFGLSTPFAATQVQSSPFGQPAVTPALPFGNVQL
TTQMAPVAPLPFSLADRDIQAIVDAYKEEPGNPKYAFKHLLFSVTEPQYRVKPAGVSDIM
WAEAIGKLEGMESSDRERLWPHLVQGFKDLSQRLKLQDEVIVSDSERLRITQSNVKMLQR
HFQADTFPWIRRMQQKEQSLQRRLLRVMRIIEALEGKGCRSPLMKGEAELAEKLASLTRQ
LKGSGAELSRRVQNLLTLSRVQANGLGGRSMYIPGSTKIHEQSLLDMQEVLQQQTEAIAR
LGNVLKRDMRDVEIIMAEETEMSED
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcaccccatcatcagccccgcccttcgggactccctcctcaacccctgcattc
ggtaccccctcttcgaccccggccttcggcactccgtcttccacccctgccttcgccact
ccatcttcaagcccagccttcggaacgccgtccaccccgtcgtttggcaccggcttcgga
acctcactgttctctactccgttctcgcagcagcaatcgcagcagagctctttctttcag
acgcctcagagctcaagccctttcggtctctcgacgccgttcgctgccacccaagtgcag
tcttctccgtttggtcagcccgctgtgactccggcattgccctttggaaatgttcaattg
accactcagatggctccagttgctcctctccccttttctcttgccgatcgtgatattcaa
gctattgttgatgcttacaaggaggagcctgggaaccctaagtatgcatttaagcattta
ttgttcagcgtgactgaacctcaatatagggtgaaacctgctggtgtatcagatataatg
tgggcagaggccatagggaaacttgaaggcatggagagttctgatcgagaacgactttgg
ccccaccttgttcagggatttaaagatctgtcacagcgcctcaagctacaagatgaagtt
atagtctcagattctgagagattgcgaataacacagagcaatgtaaaaatgcttcaaagg
catttccaagcagacacttttccttggattcggaggatgcaacaaaaggagcagagtctc
cagaggcgcctcttaagggtaatgcgaattatagaggcattggaaggcaaagggtgtcga
tcacctttgatgaagggagaagctgaattggcggagaagttggcttcattaactcgacag
ttaaaaggatcaggagcagaactttctagaagggttcaaaatctactgactctatctcgt
gttcaagccaatggccttggtggtagatctatgtatatacctggatcaactaaaatacat
gagcaaagtcttttggacatgcaggaggtcttgcaacagcagacggaggctattgctagg
cttggcaatgttttaaagagagatatgagggatgtggagatcatcatggctgaggaaaca
gagatgtcagaagactag
DBGET
integrated database retrieval system
