Coffea arabica (coffee): 113718202
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Entry
113718202 CDS
T11342
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113718202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113718202
Spliceosome [BR:
carb03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
113718202
Complex B
113718202
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
113718202
NCBI-ProteinID:
XP_027098922
UniProt:
A0A6P6VAD6
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All DBs
Position
1e:complement(54790238..54793072)
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AA seq
247 aa
AA seq
DB search
MAELTAATPGTDIPQNQTIYINNLNEKIKLDELKKSLKAVFSQFGKIVEVLAFKTLKHKG
QAWVVFEDVSSAPSALRQMQGFPFYDKPMRIQYAKTKSDVVAKADGTFVPREKRKKSDDR
GRKKKDQHDAHQPGMGLHPAYTSPYGATPPLSQLPYMAGSKAAMPEAPAPPNNILFVQNL
PHQTTPMMLQMLSCQYPGFKEVRMVEAKPGIAFVEYENEIQSTVAMQALQGFKITADNPM
LITYAKK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgacggcggcaaccccagggactgatattcctcaaaatcagactatttac
attaacaatctaaacgagaaaatcaagctcgacgagctgaagaaatcactgaaagcagtt
ttctcacaattcggaaagatagtggaagtattagcgttcaaaaccctcaaacacaaagga
caggcttgggtggtattcgaggacgtttcttctgctcccagtgcgcttcgccaaatgcag
ggctttccattctacgacaagcctatgagaatacaatatgcaaagacaaaatcagatgtc
gtagcaaaggccgatggcacttttgtacctcgagaaaaaagaaagaagagcgatgacaga
gggaggaagaaaaaggaccagcatgatgcacatcaacctgggatgggtctccatcctgca
tatactagtccctatggggcaacacctccgttgtcacagctaccatacatggctggttct
aaagctgctatgcctgaggctcctgcaccaccaaataatattctgtttgtccagaatctc
cctcaccagacgactccaatgatgctgcagatgctctcctgtcaatatcctggctttaaa
gaagttaggatggttgaagcgaaacctggtattgcttttgttgagtatgaaaatgagata
caatcaactgttgcgatgcaggcacttcaaggtttcaagatcacagcagataatcccatg
ttaataacttatgcaaagaagtaa
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