Coffea arabica (coffee): 113718634
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Entry
113718634 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11797
PH-interacting protein
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113718634
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113718634
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113718634
NCBI-ProteinID:
XP_027099325
UniProt:
A0A6P6V9P8
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Position
1e:complement(55123715..55139705)
Genome browser
AA seq
1614 aa
AA seq
DB search
MDFQKCPSWSDVPSTKMAPLNFVNKVHAVSRLEEQEGSDNHLAAANVDVDIREVYFLIMR
FLSTGPCQKTFTQILDELLEHELLPRRYHAWYSRSGAQSGHENDDGVSFPLNYDNLVKRF
PHIEDDHLVKLLRQLMLNTSTPLPCIVGRTVPSASDVPTLLGTGSFSLLCSDRNSVSKQV
KHVASYLRWPHMLADQVRGLSLREIGGGFSKHHRAPSVRFASYAVAKPSMMVQKMQNIKK
LRGHRDAVYCAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNI
LVASASNDYSIRVWRLPDGFPISVLQGHTGAVTAIAFSPRPSSVYQLLSSSDDGTCRIWD
ARSSDCSPRVYLPTPLEVVSGKTSSLPLANVPSSSNVSQCHQILCCAYNANGTVFVTGSS
DTHARVWSACKSNSDDPEQPSHEIDLLAGHENDVNYVQFSSCAVASRSSASDFSTEENIP
KFKNSWFSHDNIVTCSRDGSAIIWTPKSRRSQGKVGRWIRAYHLKVPPPPMPPQPPRGGP
RQRFLPTPRGVNMIVWSLDNRFVLAAIMDNRICVWNASDGSLVHSLTGHTASTYVLDVHP
FNPRIAMSAGYDGKTIVWDIWEGIPIWTYEIGRFKLVDGKFSQDGTSIVLSDDVGQIYLL
NTGQGEAQKDAKYDQFFLGDYRPLVQDTHGNTLDQETQVVLYNRNIQDPLCDSSLIPYPE
PYQSAYQRRRLGALNIEWCPSSSKLAVGPDIGLGQEYQVLPLADLDLVVEPVPEFADMMY
LEPENDVIHNETDSEYYITDEYTSEDEEEHSSDNSSSDPESSEENIVGRSQKDGLRRSIR
KKSLSEVEPMSTSGRHVKKRILHGNDVPLSKSKRTKRSRSGRKYTSKRKSAEVKLTRSQR
LAARNAINGFSHISEISTDGEEDESPEGDSSGNNSSFLSTNIKTQQPVDYLLNEKRYLAG
DQGSLNESEAAVTCPRTNVGNKKKLVLKLTLHNSKKSLPPEHIRSQSADHTVTASYPSKD
SGSSYTGVTKLLEGKELENIEEDLTTIAGCEQTKVHLGEAKVQSTNWMRSAHPVPADLCY
GSKLSSNCHSETCSIKHCIKPEDDCSNFRTGLEIVNHKPLSKAYNEKQEREASVSEDADG
VKVSDQNLGKGGENISDTYPCRNCDLVDGKNHSGGLNEIQKPKPTILKIKSKKISGHSFP
MEQNNLPSMPEDYKTALYEGTCASIYKGDEFPDIATDEMRRKRSLRLKATTRETGVLKQK
SIEKPSGGALNHLPSRGMPMSKQTSNHGSTRNKGEGYNNEDRSALHALQQKSNWLLLSEQ
EEGYRYIPQLGDEVMYLRQGHQEYMKSVNSLEQPPWTRYGGNIRSVEVCLVEELDYSTIA
GSGESGCRITLKFIDTSSEVNGHKFKLNLPELIDFPDFVVERTWYEASMNRNWTCRDKCL
VWWRDESEEGGSWWDGRIISIKDKSLEFPDSPWERYVIKYKSASEDLHLHCPWEMHDPSS
QCEHPCIDPEVRNKMLASVNRLLQSASRNQDQYGILKLDEVSQKDDFINKFPVPLSPDII
KLRLENNYYRTLDSLKHDIRVMLTNGQSYFARSKELSAKMCRLSDWFHKKFLKI
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagaagtgcccatcttggagcgacgtgccttctacaaaaatggcccctttg
aattttgttaataaggtccatgcagtctctcgattggaagagcaggagggttctgataat
catcttgctgcagcgaatgtagatgttgacattagagaagtttattttctgattatgcga
tttttatcaactgggccatgccaaaaaacttttacacaaattttagatgaacttttagaa
catgaacttctaccaaggagatatcatgcttggtattcaagaagcggagcacaaagcggt
cacgaaaatgatgatggcgtatctttccctttaaactatgataatctcgtcaagaggttt
cctcacattgaagatgatcacctggtaaagctgcttagacaactgatgttgaacacttcg
actccattaccttgcattgttggaagaactgttccaagtgctagtgatgtgcccactctt
cttggaactggctccttttctcttttatgcagtgatagaaatagtgtcagcaagcaagta
aaacatgttgcttcttatctccgttggcctcacatgctggcagatcaggtccgtggacta
agtttgagagaaattgggggtggtttttcaaaacaccatcgggctccatcagttcgcttt
gcctcttatgctgtagctaagccgtcaatgatggtgcagaagatgcaaaatataaagaaa
ctaaggggacacagagatgctgtgtattgtgcaatatttgatcgctctggaagatatgtc
attactgggtcagatgatcgtcttgtcaagatatggtccatggaaactgcattttgtcta
gccagttgtcgaggtcatgaaggtgacataactgacttagctgttagctcaaacaatata
ttagtagcatctgcttccaatgactacagcattcgtgtttggcgattgccagatggattt
ccaatttcagttctgcaaggacatacaggagctgttactgccattgcattcagtcccagg
cctagctctgtctatcaacttttatcgtcttcagatgatgggacttgcaggatctgggat
gcaagatcctcagattgtagtccacgtgtttacttgccaacgccattggaagttgtttct
gggaagacaagcagcctccctttggctaatgtgccttcctcaagtaatgtatcccagtgc
catcaaatcttatgctgtgcctacaatgcgaatggaactgtctttgtcactggaagctct
gatactcatgctagggtgtggagtgcttgtaaatccaattcagatgatccagagcaacct
agtcatgagattgatttgctagctggccatgagaatgatgtcaactatgtgcaattcagt
agctgtgctgttgcttccaggtcttcggcatctgatttttcaactgaggagaacattcca
aaatttaaaaattcttggtttagtcacgacaacattgttacctgctcccgtgatggcagt
gctattatttggacccctaaatcacgcagatctcagggtaaagtgggacgttggatacga
gcataccatctaaaagttcctcctccaccgatgccccctcagcctccccgaggaggtcca
cgccagagatttcttccaactcctcgtggtgttaatatgatagtgtggagcctggataat
cgctttgtgctggctgctattatggataatagaatatgcgtttggaatgctagtgatggt
agcttggtacattccttgactggtcacacggcatctacttatgttctggatgttcatccc
ttcaatcccagaattgcaatgagcgctgggtatgatggaaaaactattgtttgggatata
tgggaaggcattcctatttggacatatgagattggacgttttaaattggttgatgggaag
ttttcacaagatggaacatcgattgtactctcagacgatgttggacagatatatttgcta
aacacaggccaaggtgaagcgcagaaggatgctaagtatgatcagttcttccttggagat
taccgccctcttgtccaggatactcatggcaatactcttgatcaggagacacaagttgtt
ctgtataataggaatatccaggaccctctttgtgactcaagcttgattccttatccagaa
ccttaccagagtgcataccagcgtcgtcgactaggtgcactgaatattgagtggtgtcct
tcatcttctaaacttgctgttggtccagatattggtttggggcaagagtaccaagtttta
cctttggctgacttggacttggtggttgagccagtgcctgagtttgcggatatgatgtat
ttggaaccagaaaatgatgtcatacacaatgagacggactcagaatactacattactgat
gaatatactagtgaagatgaggaggagcattcaagtgacaattcatctagtgatccagaa
tctagtgaagaaaatatagtgggaaggagtcagaaagatggtcttcgcagatcaataagg
aaaaaatccttgtcagaagttgagccaatgtctacatctgggaggcatgtaaagaagagg
attttgcacgggaatgatgtccccttgtctaagagtaaaagaacaaagaggtcaagaagt
ggccgaaaatatacttcaaagaggaaatctgcggaagtgaaattaacgaggtcacaacgt
ttagcggcaaggaatgcaattaatggtttttcacatatttctgaaatttctactgatgga
gaagaggatgagagcccagaaggtgattcatcaggaaacaattcatcgttcctcagtaca
aacatcaagacccagcaacctgttgactatctgctcaatgagaagaggtatttggctggg
gatcaaggatctttaaatgagtccgaggctgcagtcacgtgccctcgaacaaatgtggga
aacaagaaaaagttggttttgaagctcacccttcacaactctaagaaatctttgccgcca
gaacatatcagaagccaaagtgctgaccatactgtcacagcatcatatccttcaaaagat
tcaggttcttcttacactggggtaactaaacttctggaaggtaaagaacttgaaaacatt
gaggaggacttgacgacgattgcaggttgtgagcaaaccaaagttcatttgggggaggcg
aaagttcagtcaacaaactggatgcgttcagctcatccagtgcctgcagatttatgctat
ggtagcaaattgagttccaattgccactctgagacctgtagcatcaaacattgtatcaaa
cctgaggatgactgcagcaattttcgaactggtttggaaattgtaaaccataagccgtta
agtaaggcttacaatgagaagcaagagcgtgaggctagtgtatcagaggatgcagatggt
gtaaaagttagtgaccaaaatcttgggaaaggaggagagaacatttctgatacttatcca
tgtagaaattgtgatttggttgatggcaaaaaccactccggtggtttaaatgaaatccaa
aaaccaaagccaactatcctaaagattaaatcaaagaagatatctggacattcctttcct
atggagcagaataatcttcccagtatgccagaagactataaaactgcattatacgaaggt
acttgtgccagtatctataagggagatgaatttcctgatattgctactgatgaaatgcgt
aggaaaagatccttgaggttgaaggcaacgacaagggagacaggtgttcttaagcagaaa
agcattgagaagccatctggaggagcacttaaccatcttccttcgagagggatgccaatg
tcaaaacagaccagcaaccatgggtctactagaaacaaaggagaaggctacaataatgaa
gacagaagtgcactacatgctttacagcaaaaatcaaattggttgttgttgtcggagcag
gaggaagggtatcgttacatccctcaacttggtgatgaagtaatgtacttaagacagggt
catcaagaatatatgaagtctgttaactcattagaacaacccccttggacgaggtacgga
ggaaatattagatctgttgaagtttgtttggttgaagaactggattactcaacaattgca
ggttctggggagagtggttgtagaattactcttaaatttatagacacttcatcagaagtg
aatggacataaatttaaactcaacctgcctgaactgattgattttcctgattttgttgtc
gaaagaacatggtatgaagcctctatgaatagaaactggacctgtagagataaatgtttg
gtttggtggagggatgagagtgaggaaggtggtagttggtgggatggtcgaataatttcc
attaaagacaagtctttggagtttcctgacagtccatgggagagatatgttattaaatac
aagagtgcttcagaagatttgcatcttcattgtccctgggagatgcatgatccatccagt
cagtgtgagcatccctgtattgatcctgaagtaagaaacaaaatgctggcgtctgtaaat
agattactgcaatctgcaagcagaaatcaggatcaatatgggattctaaagttggatgaa
gtttctcagaaggatgactttataaacaagtttcctgttccattatcacctgacataatc
aagttaaggttagaaaacaactactacaggaccttggattctttgaagcatgatatcagg
gtgatgttaacgaatggtcagagttactttgcgagaagcaaggagctttcggccaagatg
tgccggttgtctgattggtttcacaagaaattcttaaagatatga
DBGET
integrated database retrieval system
