Coffea arabica (coffee): 113718897
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Entry
113718897 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14856
protein SDA1
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113718897
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113718897
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
SDA1_dom
Filo_glycop
Motif
Other DBs
NCBI-GeneID:
113718897
NCBI-ProteinID:
XP_027099622
UniProt:
A0A6P6VCC5
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All DBs
Position
11e:61285738..61291913
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AA seq
820 aa
AA seq
DB search
MASAPASLLPDLNPEAITASGKDAEKLNLPALQSKMKSDPEGYEMELHLIYNQFKSSMEL
FQQQAAMSFTSVSGIAADPTVAKDLGDRALFLAHVTPFYPKHSAQFPRELAQFLRSSART
LPSGLRVHVTQALILLINRKMVDIVDILELFMELQTLGDRTLRTLAFSHIIHNIRRMNQK
HKNDPKNRGLQNILFSMLQQEDETKAKRSLITLCDLHRRKVWFDDRTANAICTACFHTSP
RIMIATLSFLLDYEKIEDDDNSDDSGSEDEQATQQPQIVLSKEVVYKAKHKGTSSSKKKK
QAKLQRAIRSMKKQQRMSSEKNNSSYYSPLNHLKDAQGFAEKLFSRLQTTNERFEVKMMM
LKVIARTVGLHRLILLNLYPYFQKYVQSHQRDVTSLLAAAVQACHDMVPPDAVEPLFKQI
VNQFVHDRSRSEAISVGLNVVREICLRMPLLMTEDLLQDLVLYRKSHEKAVSSAARSLLT
LFREVCPSLLVKKDRGRPADPKARPKAYGEVKVASNVPGFELLKDDNTESEADTDDGYTS
SSDIDDDVGPSEVEVAGHSGSSDDGDDDDNDDQDIDDQGTTSEDDSMQEENKDSEDDDAN
FSSDNTDVISDGDESGKADGHDPAASSGPLSIGSETFRTDSGGERGYKAGKRKFSDFNEQ
LNAASQSLRALKKLAGAREGSTSETNDGILSNEDFQRIKELQAKKEASIALAQHGFKIPS
TDQLSAKRVDAAKLEANIRKKMTKEERLALIRAGREERGKYQARTAIKQKKTGGLSNRQK
EHKKAMPLAAKRAKVSRSRQEKKRKQQRSGKQFRGRKAWK
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagcaccggcttcgttgttgccggacttgaatccggaggctataacagcatcg
ggaaaggatgcagagaagcttaacttgcctgctttacagtccaaaatgaagtccgaccca
gaaggctacgaaatggagctccatttgatctacaatcagttcaaatcgtccatggagctt
ttccagcagcaggctgctatgagctttacctccgtaagtggtatcgccgccgaccccacc
gtcgccaaggatttgggcgaccgggcattgttcttggcccatgtcacacccttttatcca
aaacactcggcccaatttcccagggagcttgcgcagtttcttcggtcgtcggcccggact
cttccgtcaggtcttcgagttcatgtcacccaggccctgattctcttgattaacagaaag
atggttgacattgtggacatactggaactattcatggagcttcagactctaggcgacagg
actctgaggacattggcattttcacacattattcataacattaggcgtatgaatcaaaag
cacaagaatgatccaaagaatcgtggacttcagaatattttgttttctatgcttcagcaa
gaggatgaaacaaaagcaaagagatcactcattacactttgtgatcttcaccggaggaag
gtgtggtttgatgacaggactgctaatgctatttgtactgcatgctttcatacatcaccg
aggatcatgattgctaccctctcattccttcttgattatgagaagattgaagatgatgat
aatagtgatgattcaggcagtgaagatgagcaggcaacccaacagcctcagatagtgctt
agtaaagaggtcgtctacaaggcaaaacataaaggtacctcatccagcaaaaagaaaaag
caagcaaaattgcagcgtgccatccgtagcatgaagaagcagcaacgcatgtcatcagag
aagaacaattcaagttactattcaccactaaaccacttgaaagatgcacagggatttgct
gagaagctgttctcacgccttcaaactactaatgaaaggtttgaggtgaaaatgatgatg
ctgaaagtcattgcacgaactgttggtcttcatcgcttaattctgctgaacctatatcct
tactttcaaaaatatgtgcagtcccatcaacgtgatgtaacaagtttacttgcagcagct
gttcaggcttgccatgacatggttccacctgatgcagttgaaccattgttcaaacaaata
gtgaatcagtttgtgcatgatcgatctcgctctgaggccatttctgttggactgaatgtt
gtacgggaaatatgtctgcgcatgcctctgttgatgacggaagatttgctgcaagacctt
gtgttatataggaaatcacatgagaaagcagtttcttcggctgctcgatcacttcttact
ttgtttagagaggtttgcccatcacttttggtcaagaaggatagagggcgacctgctgat
cccaaggccaggcctaaagcatatggtgaagtcaaggtcgcttccaatgtccctggattt
gagctattgaaagatgacaatactgaatctgaggctgatactgatgatggatatactagc
tcttcagatatagatgatgatgttggtcccagtgaagtggaggttgctggtcatagtggt
tcttctgatgatggtgatgacgacgacaatgatgatcaagatattgatgaccagggtacc
accagtgaagatgatagtatgcaagaagagaataaagattctgaagatgatgatgctaat
tttagttctgataatactgatgttatcagtgatggcgatgaaagtggcaaggctgatggg
catgaccctgcagcatctagtggtcccttgagtattggtagtgaaacttttaggactgat
agtggtggtgaaaggggatataaggcaggtaaaaggaagttttctgatttcaatgaacaa
ctgaatgctgccagtcaaagtcttcgagccttaaagaaactggcaggagctagagagggc
agcacctcagagacaaatgatggtattctatctaatgaggacttccagagaataaaagag
ctacaggccaaaaaggaggcaagtattgcattagctcaacatggatttaagattccaagc
acagaccaacttagtgctaaaagagttgatgctgccaaactcgaggctaatatccgaaaa
aagatgaccaaggaagaaaggctagcactgataagggctgggagggaggagagggggaag
taccaagctcgaacagctatcaaacagaaaaagactggtggtttaagcaatcggcaaaaa
gaacacaaaaaggccatgcctcttgctgccaagagagcaaaggtatcgagatcaagacaa
gagaaaaagagaaaacagcagcgttctggtaaacaatttcgtgggaggaaagcttggaag
tga
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