Coffea arabica (coffee): 113718935
Help
Entry
113718935 CDS
T11342
Name
(RefSeq) transcription factor TGA2.3 isoform X1
KO
K14431
transcription factor TGA
Organism
carb Coffea arabica (coffee)
Pathway
carb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
113718935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113718935
Transcription factors [BR:
carb03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
113718935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
WHD_TANC1
DDX23
bZIP_CREBRF_C
Motif
Other DBs
NCBI-GeneID:
113718935
NCBI-ProteinID:
XP_027099671
UniProt:
A0A6P6VAC3
LinkDB
All DBs
Position
11e
Genome browser
AA seq
468 aa
AA seq
DB search
MQSFKSATAAAPAVVTLTNSDMYCRSSIYLRGHEGGGGRNWTNYVDLGELEQSSFHQEHA
VDLSTSSIYSDMKPSNVVAVSNSSLQFGGLNTNMGSGEMGSSGAVADTGQFLMQKGTMLS
VGAGGTLGSGNFENWGESGMADHSQQTDTSTDVDTDEKSQFHGVRRGTLVGMDSMEQSGE
RNGDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLTQLEQELKQARQQGVLKASGY
TGDQSMSGALAFDMDYARWLDEHQRMINDLRTAVNSQLGDNELRLIVDGVMSHYDEIFRL
KDIGTKSDVFHMLSGMWKTPAERCFMWLGGFRSSEILKILGNHLEPLTDQQLIGICNLQQ
SSQQAEDALSQGMEALQQSLVETLSSNSLGPSGSTNVADYMGQMATAMGKLAMLENFLRQ
ADLLRQQTLQQMHRILTTRQAARALLVINEYMSRLRALSSLWLARPKD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcttcaaatcagcaacagcagcagctccagcggtagttactcttaccaactcg
gatatgtattgccgttcgtccatttatctgaggggtcatgaaggtggtggtggtagaaat
tggacaaactatgtggatcttggggagcttgagcagtcatcatttcaccaggagcatgct
gttgatttaagcacaagttcgatatacagcgacatgaagccaagcaatgttgttgctgtt
agtaattctagcttacagtttggtgggcttaacacgaatatgggttctggagagatggga
tcatcaggagctgtagcggatacggggcagttcttgatgcagaaggggacaatgctgagt
gttggagctggtgggactttgggaagtgggaattttgagaactggggagagtctgggatg
gcagatcacagccaacagactgatacttctacagatgttgacactgatgagaaaagccag
tttcatggcgttcgccgtggaacattagtaggcatggattcaatggaacagtcaggagag
agaaatggagaccagaagacactgcgaaggctggctcaaaaccgagaagctgctcgaaag
agtcgattgagaaagaaagcatatgttcaacagctggaaaatagtaggcttagacttaca
caactggagcaggagctcaaacaagcacggcagcagggtgtactcaaggctagtggatac
acaggagatcagtctatgagtggggctttggcatttgacatggactatgcccgctggctt
gatgaacatcaaaggatgattaatgatctcagaacagctgtcaattctcaactgggagat
aatgaactgaggctaattgttgatggagtaatgtcacactatgacgaaatattcaggcta
aaagatattggcactaagtcagatgtatttcacatgctctctggcatgtggaagactcca
gcagaaaggtgtttcatgtggttgggcggatttcgttcatctgagattctcaagatactt
ggaaaccatcttgaacctctgacagatcaacagttgataggcatctgcaatctgcagcag
tcctcccagcaggctgaggatgccttgtctcaaggaatggaagctttgcagcaatcgctt
gttgagacactttcgtctaattcccttggtccaagtggttctactaatgtggctgattac
atgggacagatggcaactgcgatgggtaagcttgccatgctggagaacttccttcgtcag
gccgacctcctgaggcagcaaactttgcagcaaatgcataggatactgaccactcgtcaa
gctgctcgtgccctccttgtcattaatgaatacatgtcgaggcttcgggcacttagttct
ttgtggttagcacgccctaaggattga
DBGET
integrated database retrieval system
