KEGG   Coffea arabica (coffee): 113719024
Entry
113719024         CDS       T11342                                 
Name
(RefSeq) elongator complex protein 2 isoform X1
  KO
K11374  elongator complex protein 2
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:carb03016]
    113719024
Transfer RNA biogenesis [BR:carb03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    113719024
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML Beta-prop_Aladin Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR75_2nd Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_ELP1_2nd CX
Other DBs
NCBI-GeneID: 113719024
NCBI-ProteinID: XP_027099804
UniProt: A0A6P6V9Z4
LinkDB
Position
Unknown
AA seq 834 aa
MGSKSDGMQQVKVERVFIGAGCNRIVNNVSWGACDLVAFGSQNAVAILCPKIAQILTTLP
GHKASVNCTYWLPNAKFAYKAVEMERHYLLSGDADGVIILWEYTILDKKWRHVLQVPQPH
IKGVTCICGIMMSQKDAVFASTSSDGTVNVWELVFPCTSEGDCKLSCVETLSIGSKSMVA
LSLAELPGNSGHLALAMGGLDNKIHLYCGQRTGKFVPACQLKGHTDWIRSLDFSLPILGI
GETFILLVTSSQDKGIRIWKIAFHDSLDTKKEEISLASYIKGPVFVAGSNSYQVSMESLL
IGHDDWVYSVEWQPPSIINGNECYQPQSLLSASMDKTMMIWKPEKTTGIWINVVTVGELS
HCALGFYGGHWSPKADSILAHGYGGSFHLWKDVGVASDDWKPQKVPSGHFAAVSDIAWAR
QGEYILSGSHDQTSRIYAPWPKNSCLENEDNWHEIARPQVHGHDINCVTIIQGKGNHRFV
SGAEEKVARVFEAPLSFLRTLRHATSGDSSLLDDLQAEVQILGANMSALGLSQKPIYSQV
SPETTNRSNTDGLDTLETVPEAVPVEFTEPPIEEQLAWNTLWPESHKLYGHGNELYSLCC
DHSGKLVASSCKAQSASVAEVWLWQVGSWKSVGRLHSHSLTVTQMEFSHDDKYLLVVSRD
RHFSVFSIKDAGADEINHELMVRQEAHKRIIWACSWNPFGHEFATGSRDKTVKIWAVENA
STIKQLMTLPSFKSSVTALSWVGLGRQSNHGFLAVGMESGLIELWSLSCERSDNGNLMVP
NATCVVQFDPFLCHASPVNRLTWRHSEKIPDSKVIQLASCGADHCVRVFNIDFL
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgggatcaaagagtgatgggatgcagcaagtaaaagtggagagagtattcattggagca
ggttgtaacagaatagttaacaacgtttcatggggtgcctgtgatttagttgctttcggt
tctcaaaacgctgttgccatcttatgccccaagattgcccagattttaactacacttcct
ggtcacaaggcatcagtcaactgcacttactggcttcccaatgcaaagtttgcttataaa
gctgttgagatggaaagacactatctgctatctggagatgctgatggtgtcattattttg
tgggaatatactattttggataagaagtggaggcatgtgttacaagtaccacaaccacat
ataaaaggtgttacttgtatctgtgggatcatgatgtcacagaaagatgcagtatttgca
tcaacctcctcagatggcactgtgaatgtctgggagttggtgtttccatgcactagtgaa
ggtgactgtaaattatcatgtgtggaaaccctttctattggttcaaagtctatggtcgct
ctttcactagcagagttgcctggaaattctggacatctagctttggctatggggggattg
gataacaagattcatctgtattgtggtcagaggactggaaaatttgttcctgcctgccag
ttgaaaggacatactgactggatacggagtttggatttctccttacctatacttggaatt
ggtgaaacgtttattttacttgtaacttcgtctcaagacaaaggtattcgcatatggaag
atagctttccatgattctttggatactaagaaagaagaaatcagcttggcttcctacatc
aaaggtccagtgtttgtggctggctcaaactcgtatcaggtttctatggaatctctgctc
attggccatgacgattgggtgtactccgtggaatggcagcctccatccatcatcaatggc
aatgaatgttatcaacctcaaagcttactatcggcatccatggataagacaatgatgatc
tggaaacctgaaaagactactggtatctggatcaatgtggtaactgttggggaactaagt
cattgtgctttaggattttatggagggcattggagcccaaaagcagattcaattttggct
catggatatggtggatctttccatctatggaaagatgttggtgttgcttctgatgattgg
aagcctcagaaagttccctctggacattttgctgcagtgtccgacattgcgtgggctaga
cagggggagtacatattgtctggaagtcatgatcagacgagtagaatatacgcaccttgg
cctaaaaactcttgtttagaaaatgaagacaattggcatgaaattgcgcggcctcaagtt
catggccatgatataaactgtgttaccattatccaaggaaaagggaaccatcggtttgta
agtggggctgaggagaaagttgctagagtttttgaagcaccactgtcctttttaagaact
ttaaggcatgcaacctcaggagactccagtttgcttgatgatcttcaagctgaagtgcag
attttgggtgcaaatatgtctgctttggggctgtcacagaaacccatttacagtcaagtt
tcacccgagacaaccaacagaagtaatactgatggtctagacacactagaaactgtccca
gaagctgttccagttgaatttacagaaccacctattgaagaacagctagcgtggaacaca
ctatggccagagtcccacaagctatatggtcacgggaatgaattatactctttgtgttgt
gatcacagtggaaaacttgttgcttcatcttgcaaggctcaatcagcatcagtggcagaa
gtgtggctttggcaagttggttcttggaagtccgttggccggttgcattctcacagttta
acagtgacacaaatggagttctctcatgatgacaaatatcttttggtagtctctagggat
cgccacttctctgttttctcaatcaaagatgctggagcagatgaaattaatcatgagctg
atggtgaggcaggaggcgcacaaaagaataatatgggcatgttcatggaacccgtttggt
catgaatttgccacaggttctagggataagaccgtcaagatctgggcagtggagaatgca
tctaccattaagcagcttatgacgctgccatctttcaagagcagtgtcactgcactatcc
tgggtaggccttggtcgccagagcaatcatggatttcttgctgtaggaatggaaagcggg
ttgatcgaattgtggagtctttcttgtgaaaggtctgacaatgggaatttaatggtgcca
aatgcaacttgtgttgttcagtttgatcctttcttgtgccatgcttccccggttaaccgg
ttaacatggagacattctgaaaaaattccagattctaaggtcattcagcttgcatcttgt
ggagctgaccattgtgtaagagtgttcaatatagattttctttag

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