Coffea arabica (coffee): 113719071
Help
Entry
113719071 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113719071
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113719071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_4
LRR_6
LRR_At5g56370
LRR_RPS2
LRR_8
LRR_At1g61320_AtMIF1
LRR_14
LRR_NXF1-5
F-box_5
Motif
Other DBs
NCBI-GeneID:
113719071
NCBI-ProteinID:
XP_027099883
UniProt:
A0A6P6VAD7
LinkDB
All DBs
Position
11e:complement(44080717..44090963)
Genome browser
AA seq
423 aa
AA seq
DB search
MAVFSATSRADVGFLHQNGSIPCINDSLGDDELRAILLKLENDKDKEIFGLVCKRWLHLQ
STERRKLCARAGPHMLRRMAARFTRLVELDLSQSTSRSFYPGVTDSDLSVIATAFSCLRI
LILQNCKGISDIGMKAIAANLPYLQSLDVSYCRKLRDEGLSAVAQGCRDLRVLHLSGCRF
VTDSLLRTLSDNCNNLEELGLQGCSSITDSGLVLLVQGCWRLKNLDVNKCSNVGDIGVTS
VSKACASLKTLKLLDCYKVGDASILSLANFCGDLQNLIIGGCRDVSDESLKQLAVACSNS
LKNLRMDWCLNISDSSIECILQNCKKLEMLDIGCCEEATDAAFQGLGGGLFELHLKILKV
SNCPKITVVGIGNLLKSCNSLKYLDVRSCPHVTKADCDQAGLQFPETCKVNFTGSLTEPE
VLF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcttctctgccaccagtagggccgatgtcgggtttttacatcaaaatggctcc
attccgtgcataaatgacagcctaggcgatgacgagcttcgggccattttacttaagctg
gaaaacgacaaagataaggagatatttggactagtttgtaaacgatggcttcacttgcaa
agcaccgaaagacgcaagctttgtgctcgggccggaccccacatgctccggagaatggcg
gctcggttcactcgtttggtcgaacttgatctctctcagtccacttccaggtctttctac
cctggtgtcactgactctgatctttccgtaattgccacggctttctcatgcctcagaatc
ctcattcttcagaattgtaaaggtatatcagatataggtatgaaagcaatcgctgctaat
ctcccttatctgcagtcattagatgtttcatattgtaggaaactaagagacgaggggttg
tctgctgtggctcagggctgtcgtgacctgagagtcttacatctttctggctgcagattt
gtgacggattcattgttaagaactctttctgacaactgcaataacctagaagaattgggt
ttgcaaggatgctcaagcataaccgattctggtcttgtgcttcttgttcaaggctgttgg
aggctgaagaacttagatgtaaacaaatgcagcaatgttggtgatataggggtaactagt
gtctctaaagcttgtgcttctttgaagacattgaagttgttggactgctataaagttgga
gatgcatccatattatccttggccaacttctgtggggatcttcagaatttaataattggt
ggttgccgcgacgtatctgacgagtccctcaagcaattggcagttgcttgtagcaacagt
cttaagaatcttaggatggattggtgtttaaacatttctgattcttccatagagtgcata
cttcaaaattgcaagaagcttgagatgcttgatataggttgctgtgaagaggcgacagat
gctgcatttcagggacttggaggtggactcttcgagcttcatttgaagattttgaaggtt
agtaactgtccaaagatcacggtagtagggattggcaatctattgaagtcgtgcaactct
ctcaaatatcttgatgtacggtcatgccctcatgttactaaagcggattgtgatcaggcc
ggattgcagtttcctgaaacttgtaaagttaactttactgggagtttgactgagcctgag
gtgttattctag
DBGET
integrated database retrieval system
