Coffea arabica (coffee): 113719129
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Entry
113719129 CDS
T11342
Name
(RefSeq) ubiquitin receptor RAD23c-like
KO
K10839
UV excision repair protein RAD23
Organism
carb Coffea arabica (coffee)
Pathway
carb03420
Nucleotide excision repair
carb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113719129
09124 Replication and repair
03420 Nucleotide excision repair
113719129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
carb03051
]
113719129
03400 DNA repair and recombination proteins [BR:
carb03400
]
113719129
Proteasome [BR:
carb03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
113719129
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
113719129
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_RAD5A
UBA_Ucp12
CUE
UBA2_UBAP-1
Rad60-SLD_2
Dsc3_N
NQRA_N
UBA_3
TECR_N
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
113719129
NCBI-ProteinID:
XP_027099998
UniProt:
A0A6P6VAN9
LinkDB
All DBs
Position
11e
Genome browser
AA seq
390 aa
AA seq
DB search
MKVFVKTLKGTHFEIEVKPEDSVTDVKKSIETAQGAEVYPASQQMLIHQGKVLKDGTTLE
ENKVVENSFIVIMLSKSKSSPGEGSTASTAATAKVAQSSAPPVAAEAASNPQPAVAQTAS
SPQPPAVTPAPSTTQPPAAVSDADVYGQAASTLVAGNNLEGAIQQILDMGGGTWDRDTVV
RALRAAYNNPERAVEYLYSGIPESAEAPPVSGTPPSGQTTSPPAQLPPSTQPAAVPSSGP
NANPLDLFPQGLPNLGSNPAGANTLEFLRNSQQFQALRAMVQANPQILQPMLQELGKQNP
HLMRLIQEHQADFLRLINEPIEGGEGNILGQLAGAMPQTIQVTAEEREAIRRLEEMGFDR
ATVLEVFFACNKNEELAANYLLDHMHEFEE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttcgtgaagactctcaagggcacgcacttcgaaattgaagttaaacctgaa
gactcggttactgatgtgaagaaaagcatagaaactgctcagggggcagaagtttatcct
gcttcccagcaaatgcttatccatcaggggaaagttctcaaggatgggaccacattggaa
gaaaacaaagttgttgaaaatagttttattgtcatcatgttatctaagagtaagagctca
ccgggtgaaggttcgacagcttcaactgcggccacagccaaggtagcacaatcaagtgcc
ccacctgttgcagctgaggctgcatcaaaccctcaacctgctgtagctcagacagcatca
agtcctcaacctccagctgtaactccagcaccatcaacaactcaacctcctgctgcagta
tctgatgctgatgtctatgggcaagctgcatctactttagttgctggtaacaaccttgag
ggagctattcagcagattcttgatatgggtggaggaacatgggatagggataccgttgtt
cgagcccttcgcgctgcttataacaacccagagagagctgttgagtatctatattctggc
atcccggaatcggctgaggctccacctgtgagtggaactccaccgagtgggcagaccact
agtccaccagctcagcttcccccatccacgcaacctgctgctgttccatcaagtggacca
aatgctaatccgttagatctctttccccagggtcttccaaacttgggttcaaaccctgct
ggtgcaaacactttagaatttctgcgcaacagtcagcagttccaagcattgcgagcaatg
gtgcaggcaaaccctcaaattttgcagccaatgctccaagagctagggaagcaaaatcct
catttgatgcgacttattcaggagcatcaggcggatttccttcgtctgattaatgaacct
attgaaggaggagaagggaacatacttggtcagcttgctggagcaatgccacaaactata
caagtgacagctgaagagcgcgaagctatcagacgtctggaagaaatggggtttgatcgc
gcaactgtgctggaagtgttctttgcttgcaacaagaatgaggagctggctgctaactat
ctcttagatcatatgcatgagtttgaggagtga
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