Coffea arabica (coffee): 113719163
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Entry
113719163 CDS
T11342
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
carb Coffea arabica (coffee)
Pathway
carb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113719163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113719163
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
carb04147
]
113719163
Membrane trafficking [BR:
carb04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
113719163
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
113719163
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113719163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
Ank
BAR
PH
Ank_4
Ank_3
Ank_5
ANK_LRRK2
PH_11
BAR_2
PH_8
PH_20
DUF6760
Motif
Other DBs
NCBI-GeneID:
113719163
NCBI-ProteinID:
XP_027100068
UniProt:
A0A6P6VAU9
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All DBs
Position
11e:complement(62426676..62437528)
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AA seq
828 aa
AA seq
DB search
MHFAKLDDSPMFRKQIQCSEESAESLRERCLKFYKGCRKYTEGLGEGYDGDIAFASSLET
FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNIDLHDVKE
ARKRFDKASLLYDQAREKFLSLRKGTKSDVATLLEEELHNARSTFEQARFNLVTALSNVE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNER
MQEYKRQIDRESRWSSNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAARGKVQTIRQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQTSKPSGSGSQLSAQRNSSELGSGLLSRWLSS
HYHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWI
EKITGVIASLLSSQAPERCLPASPMGSGHHRSASESSSFESSDFDHAAAEDYASERLASV
HLERPFRNSQQPRSCVKSEKPIDVLRKVCGNDKCADCGAIEPDWASLNLGVLVCIECSGV
HRNLGVHISKVRSLTLDVKVWEPSVLTLFQSLGNSFANSVWEDLLQSRISFQMDLGPAGL
YKTDKPQLIRINKPSPADSISTKEKFIHAKYADKAFVQKIRDIRLVAHQIWEAVRTNDKK
AVYRLIVSSEADLNAVCEEAVSNSSLTLAKAMLLQEQSGIDHKYSYLEAESLGKLCSSSS
HMASTSRIHMTEDLSGCSLLHLACETADIGMLELLLQYGVNINASDSRGQTALHRCVMRG
KAPFVKLLLSRGADPQALNGEDKTPFGLAVESNLDDNEILAMLCESNG
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcgctaagcttgatgactctcccatgttccgcaagcagatacaatgctctgag
gaaagtgcggaatccttgagggaaagatgtttgaaattttacaaaggctgtcgaaaatac
actgaaggacttggagagggatatgatggggacattgcttttgctagttccctagaaact
tttggtggtgggcataatgatcccattagtgttgcctttggaggtcctgtcatgacaaaa
tttactattgcattgagggagattggaacgtacaaggaagtccttaggtctcaggttgag
cacatgctaaatgatcgattgctgcaatttgtcaatatagatctgcatgatgtcaaggaa
gcacggaagcgttttgataaggctagccttctttatgatcaggcaagggagaagttcttg
tctcttaggaaaggcacaaaaagtgatgtggctactctcttagaggaggagcttcataat
gcaaggtcaacctttgagcaggcgcgctttaatctggttactgctctttctaatgttgaa
gcaaagaagaggtttgaattcttggaagcagttagtggtacaatggatgcccatcttcgt
tatttcaaacaggggtatgagctattacatcagatggagccatatatcaatcaggtcctg
acatatgcgcaacaatcaagagaacggtcaaactatgagcaggcagcacttaatgaaagg
atgcaagagtataaaagacaaattgatcgggagagcaggtggtcttcaaatggttccaac
ggttcacctaatggagatggtatacaagccattggtagaagttcacacaaaatgatcgag
gcagtcatgcaatctgcagcaaggggaaaggttcaaaccatcagacaaggttatctttca
aaaaggtcatcaaacttgagaggtgactggaaaagaaggttctttgtccttgatagtcga
ggaatgttgtactactatcgcaagcaaaccagcaaaccttctggatctggcagtcaactt
tctgctcagaggaacagttctgaattgggttctgggctgctgagtcggtggctttcttct
cattatcatggtggagtgcatgatgagaaatcagttgctcatcatactgtcaacctgttg
acatcaacaataaaagttgatgctgaccagtcagacctgaggttttgcttcaggataatt
tcaccaacaaagaactataccttgcaggcagaaagtgccctggatcagatggattggatt
gaaaagattactggggtcattgcttccttgctgagttcccaggctcctgagaggtgtttg
cctgccagtccaatgggaagtgggcaccaccgatctgccagtgagagtagttcatttgaa
agctctgattttgatcatgcagcagcggaggactatgcttctgagaggcttgcctcggtg
catcttgaacgcccatttagaaattcacaacaacctcgatcatgtgtgaaaagtgagaag
ccaattgatgtgttgcgaaaagtatgtggaaatgataaatgtgctgattgtggtgccatt
gagccagattgggcatccttaaatctgggtgttcttgtctgtattgagtgttccggtgtt
catcgcaatctcggcgtgcacatatcaaaggtgagatcgttgaccctcgatgtgaaagta
tgggaaccctctgttctaactttatttcagtctttgggcaatagctttgcaaattcagtt
tgggaggatttgttgcagtctaggatcagcttccagatggatcttgggcctgcagggttg
tacaagactgataaaccacaattaatacgcataaacaagccaagtcctgccgattccatt
tcaacaaaggagaaatttatccatgcaaagtacgcagataaagcttttgttcaaaagatt
agggacattcgattagttgcacatcaaatctgggaggcagttcgtactaatgacaagaaa
gctgtgtaccgtctcattgttagctctgaagcagatttgaatgctgtttgcgaggaggct
gtctctaattcttcattgacccttgccaaagcaatgctgttgcaagaacagagtggcatt
gatcacaagtatagctacttagaggctgagtcattgggcaagttgtgctcgagttcttcc
cacatggcaagtactagcagaatccatatgaccgaagatctgtctggttgctccctgctc
caccttgcatgtgaaactgcggacataggaatgctggagcttcttctgcagtatggtgtg
aacattaatgcatctgattcaagaggccagactgcacttcatcgttgtgtaatgagaggc
aaagctccatttgtcaagctgctcctttcgaggggagctgatccacaggctcttaatgga
gaagataaaaccccttttgggcttgctgtggaatcaaatctggatgacaatgagattctt
gccatgttgtgcgagtcgaacgggtga
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