Coffea arabica (coffee): 113719174
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Entry
113719174 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113719174
Enzymes [BR:
carb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
113719174
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
113719174
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GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_12
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
113719174
NCBI-ProteinID:
XP_027100084
UniProt:
A0A6P6VAV1
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Position
1e:complement(55538446..55542118)
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AA seq
463 aa
AA seq
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MVDLKSERCQFRLPKKNRLCANAPLPNSSFCGNHTQRSNHQWIQCPLDPSHSVLQHNLEN
HLTRCPSLKQAQSLSLQPYYQKGINAGGGIDEDHTATASHMKRRAVYNKTVPEFCDLIRK
IKSIHASLSDNTRIQDSFKIPQACAVWSTRRQIDRKLPFQEKHVLQQASILGNLEEFGLL
RKSGVEDAVIDATTLDRSDVDVPAVVEFGAGRGYLTQLLADCYGIKKVLLVERKSYKLKA
DRSLRQIENLMLERLRIDIEDLNLNAVESLQGVPYLAIGKHLCGPATDMTLKCCILEQSA
QNHADQLKASCFLRGLAIATCCHHLCQWKHYINKNYILNLGLTKEDFHAMTWLTSWAVDA
DHGSDIFVVDSSPNLCLNEKEEIGAELSQSGVGDVVRNMSAVERAVVGFMCKDIIDAGRL
MWLKERGLHSQVVKYVPPGISPENHLLIARQSNGLYDDSVAVK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggtggatttgaagagtgagcgctgccagtttcggctcccaaagaagaatagactctgt
gccaatgctcctctccctaattcctctttctgcggcaaccacacgcaaaggtccaatcac
caatggattcaatgcccccttgacccttctcactccgtactccagcataatcttgaaaat
caccttaccagatgcccttccctcaaacaagctcagtctctctccctccaaccctattac
caaaagggcatcaatgccggcggaggcatcgatgaagatcatactgctactgcttcacat
atgaagagacgagctgtctacaacaagactgtccctgaattctgtgacttgatccgcaaa
atcaagagcattcatgcatccctctccgataatacccgcattcaagattctttcaagatt
cctcaagcttgtgctgtttggtctactcgtagacaaatcgatcggaagttacccttccaa
gagaaacatgttttgcagcaggcctccatccttggtaacctggaagaatttggactgttg
cgcaagtctggtgtagaggatgctgtaattgatgcgacgactctagaccgcagcgatgtt
gatgttcctgctgtcgtggaatttggagctgggaggggttacctgacccaattgcttgct
gactgctacgggattaaaaaagtgcttttggttgagcgcaagtcctacaagcttaaggct
gatcgaagtttgagacaaatagagaacctgatgttggagcgcttgaggatcgatattgaa
gatttgaacttgaatgctgtcgagtctttgcaaggggttccttatttggcaattggtaaa
catctttgtgggccggcaacagatatgacgttgaagtgttgcatattggaacaaagtgct
caaaatcatgctgatcagttgaaagccagttgtttcctcagaggtctcgctatagctacg
tgctgtcatcatctttgtcagtggaaacactacataaataagaactacatattgaatctc
ggtttgaccaaggaagatttccatgcaatgacatggcttactagctgggcagttgatgca
gaccatggatcagacatttttgtcgttgacagctcgccgaatctatgtctcaatgagaag
gaagagattggagcagaattaagtcagtctggagtgggagacgttgttaggaatatgagc
gctgtggagagggcagtggtgggattcatgtgtaaggatatcattgatgctggaagattg
atgtggctcaaggagcgtggattacactctcaagttgtaaagtatgttccacccggtatc
tctcctgaaaaccatttactgattgctaggcagagcaatggattatatgatgattctgtt
gctgttaaataa
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