Coffea arabica (coffee): 113719312
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Entry
113719312 CDS
T11342
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113719312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113719312
Spliceosome [BR:
carb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113719312
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
113719312
NCBI-ProteinID:
XP_027100321
UniProt:
A0A6P6VEF0
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Position
11e:60380024..60384237
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AA seq
486 aa
AA seq
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MATLADSFLADLEELSDNEADSLNEDNGDAEQMEEDVDGDLADIEALNYDDLDSVSKLHK
TQRYNDIMQKVEDALEKGSDISNQSIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVISVTASTTSGKP
LPDEVLQKTIDACDRALTLDSAKKKVLDFVESRMGYIAPNVSAIVGTAVAAKLMGTAGGL
SALAKMPACNVQLLGAKRKTLAGFSTANSQIHVGYLEQSEIFQSTPPTLRKRACRLLAAK
STLAARIDSIKGDSTGKVGRSLRDEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKTKERYALTDMRKLANRMAFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSSAGPSKLS
AKVAKKFKEKQYGSSGATSGLTSSLAFTPVQGIELSNPQALANQLGSGTQSTYFSETGTF
SKIKRT
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctacccttgctgattcattcctggcagatcttgaggaattgtctgataatgaagct
gatagtcttaatgaggataatggggatgccgagcaaatggaagaagatgttgatggggac
ttggcagacatcgaagctctgaattatgatgacctggacagtgtctccaagctacataag
acacagcggtataatgatataatgcagaaagttgaagatgcacttgagaaggggtctgac
atttccaatcaaagcattgttttggaggatgatcctgagtatcagttgattgtagactgc
aatgcattgtcagttgatattgagaatgaaattgtcataatccacaattttattcgtgat
aagtatcgcttgaagtttccagaactagaatctctggttcatcacccgattgattatgct
cgtgtggttaagaaaattggaaatgagatggatcttacccttgttgatcttgaaggtctt
ctgccttcggccattatcatggttatttcagttactgcatcaactaccagtggaaagcca
cttccagatgaagtcttgcagaagacaattgatgcatgtgatagagctctcactctagat
tcagccaagaaaaaggtccttgattttgtggagagtcggatggggtatattgctcctaat
gtttcggctattgttggaactgcagttgctgcaaaactcatgggaacggctggtggtctt
tctgcactggcaaagatgcctgcttgcaatgtacagcttcttggtgccaagaggaagacc
ttagcagggttttcaacggcaaattcccaaatccatgttggttatcttgagcaaagtgaa
atatttcagagtacgccacctaccttgagaaaacgtgcctgtcgactcttggctgcaaag
tctaccttggcagcacgtatagactctataaaaggtgattcaactgggaaagtgggaaga
tctttacgtgatgaaattctcaaaaagatagagaaatggcaagaaccccctcctgcaaag
cagcctaaacctctgcctgttcctgattctgagcccaagaaaaagagaggtggtcgaagg
ctgcggaagacgaaagagagatatgctttgacagacatgaggaagctggcaaataggatg
gcttttggagttcctgaagagagctctttgggtgatgggcttggcgaagggtatggaatg
cttggtcaagctggtagtggaaaattgcgtgtatcatcagctggtcctagcaagctttct
gcaaaagtagctaagaagttcaaggaaaagcagtatggaagcagtggtgctacctcagga
cttacctccagtttagccttcacacctgtgcaggggattgagcttagcaatcctcaagca
cttgcaaatcagcttggaagtggaactcaaagcacctatttctcggaaactggtacattt
tcaaagataaagcggacatga
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