Coffea arabica (coffee): 113719330
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Entry
113719330 CDS
T11342
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113719330
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113719330
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
113719330
NCBI-ProteinID:
XP_027100342
UniProt:
A0A6P6VEH0
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Position
11e
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AA seq
400 aa
AA seq
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MPHSILFFLLLLLASTNTLSSPVPDPESVVQEVNEKINASRRNLAFLSCGTGNPIDDCWR
CDPNWEKNRQSLADCAIGFGKHAVGGRDGEIYVVTDNGDHPVNPKPGTLRYGVIQDEPLW
IIFARDMVIQLKEELIMNSFKTIDGRGANVHIAGGPCITIQYVTNIIVHGLNIHDCKQGG
NAYVRDSPEHFGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNY
LTHHNKVMLLGHSDTYLQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY
AIGGSAAPTINSQGNRFLAPNDIFNKEVTKHEVAPESEWKSWNWRSEGDLMLNGAFFTTS
GAGASSSYSKAYSLGARPSSLVASLTSGAGSLICRKGSRC
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgccacattccattctgtttttcctgcttctgttattggcctcaactaacacattgtct
tcaccagtgccagaccccgaatcagtagtgcaagaagtaaacgagaaaataaatgcatcg
agaagaaatctggccttcctttcttgtggcactggcaaccctattgatgattgctggagg
tgcgaccccaattgggagaagaaccgccaaagcttagctgattgcgctattggatttggt
aagcatgctgttggtggaagagatggtgaaatctacgtggttacggacaatggagatcat
cctgtgaatcctaagcctggaactcttagatatggtgtcatacaagatgaacctttatgg
attatatttgctcgtgatatggtgatccagctcaaggaagagctgataatgaactcattc
aagacgattgatggtagaggtgctaacgtccacattgcaggagggccatgcattactata
caatatgtaactaatatcatcgttcatggcctaaacatccatgattgcaagcaaggtgga
aatgcgtatgtgagagactcgcctgaacatttcggatggagaacgctctcagatggcgat
ggagtttccatctttggtggaagccatgtttgggtggatcattgctctttgtccaactgc
cgtgatggtctgattgatgcaatccatggatctacagccatcaccatttctaacaactac
ctgacgcatcacaacaaggttatgcttttaggccatagtgacacatacttacaggacaag
aatatgcaagtcactatagctttcaaccattttggtgaagggttagtacagaggatgcct
agatgtagacacggatacttccatgtggtgaacaatgactacacccattgggaaatgtat
gcaattggtggcagtgctgctcccaccatcaatagccaaggcaaccgatttcttgcacca
aatgatattttcaacaaagaggttacgaaacacgaggttgcaccagagagtgaatggaag
agctggaactggaggtctgaaggggacttgatgctgaacggtgccttcttcactacgtcc
ggggcgggagcctcttctagctactcgaaggcatacagcttgggcgccagaccatcttcc
ctggttgcctccctcacttctggagctggctcattaatctgcaggaaaggctcacgctgc
tga
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