Coffea arabica (coffee): 113719391
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Entry
113719391 CDS
T11342
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
carb Coffea arabica (coffee)
Pathway
carb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113719391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113719391
Enzymes [BR:
carb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113719391
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
113719391
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
UBA_SDE5
Motif
Other DBs
NCBI-GeneID:
113719391
NCBI-ProteinID:
XP_071928321
UniProt:
A0ABM4W963
LinkDB
All DBs
Position
11e
Genome browser
AA seq
1190 aa
AA seq
DB search
MSGDDNDNESNYAYGKRTLAPHLLKEKDYSALEELFRHHIESFDHMVEYGIETMLLNIKP
VQVFHPLSNQKLRIWFGKPEIFPPQTERQLRTMKDALYPFECRQAKISYTGTFMMDICFQ
YGDGAVIREKFNFGQFPIMLKSKLCYLRNLPPKKLVSLKEEQSEMGGYFILNGLERVVRL
LILPKRNYPTSMVRNSFRERREGYTDKAVVIRCVREDQSAVSLRLYYLSNGSARLAFWIQ
GREYMLPVGVMLKALADTTDHEIFACLTSCYDDNYDCVKGSVGSQLVGERAKIILDEVQD
LSLFTHKQCLQHIGEHFQPVMIGLENESPSVVAAAVLKDYIFVHLDNNHDKFNLLIFMVQ
KLFSLVDHTSMPDNPDSLQNHEVLLPGHLITIYLKEKLQEWLLKTKNLLQDEANNSNKFD
INSLADIKKLIEKNSPKQISSAIDNMLKTGTLLTQSGLDLQQRAGMTVQAERLNFLRFLS
HFRAVHRGSAFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMSSSCRITSYYDNK
GNVRDFLKTRMSILSVLVGVGMTPSLPKLVQAGPPKVLSVLLDGRVVGSIPSDLVEKAVT
HMRRLKLSATAQIPEDLEVGYVPLSMCGAYPGLFLFTSPSRFVRPVRNISIPPEEGNMVE
LIGPFEQVYMEISCPDGGGGGRKNMFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQ
CQMGKQTMGFPSQALHSRADQKLYHLQTPQTPIVRTKAYEKYHIDEFPLGTNAIVAVLAY
SGYDMEDAMVLNKSSVERGMFHGHIYQTETIDLTEQRSNSGRGQRIFRRSNLDKSSQHLV
DSDGLPYVGQRIRPNEPYCSIYNEITSSTSSTKLKGSESVVVDYVAVDVKNKNNLQKVNI
RFRRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFAGLTGMRPDLIINPHAFPSRMTIGM
LLESIAAKGGALHGKFMDATPFTSLLKKGNEGQESESSSLVDELGSMLTAYGFNYHGSEV
LYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFG
EMERDSLLAHGAAYLLHDRLHISSDHHVADVCSICGSLLTTSLIPTKQRAIREIIGLPPG
RIPKKVICVACQTSKGMETVAMPYVFRYLAAELAAMNIKMILQLSSGAEA
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgacgataacgataacgagagtaattatgcctatggcaagaggactctggcg
ccgcacttattgaaggagaaagactattcggcattggaggagctgtttcgccaccacatc
gagtctttcgaccatatggttgaatatggaatcgagactatgctactcaatataaagcct
gttcaagttttccacccgctttccaatcaaaagcttagaatttggtttggaaaaccggaa
atatttccaccgcaaactgaacgtcagttaaggacaatgaaggatgctttatatccattt
gagtgcagacaagctaaaatatcatatactgggacgttcatgatggacatctgctttcaa
tatggtgatggagctgtcatacgagaaaaattcaattttgggcagttcccgattatgttg
aagtcaaaactttgttacctgaggaatcttcctcccaaaaaactagtttctctcaaagag
gagcagtcagaaatgggtggatacttcattttgaatgggcttgaaagagttgttcgactt
ctgattttgccaaagcgaaactatcctacgagtatggtacgaaattcatttcgtgaacgg
cgagaaggatacactgataaagctgttgtcataagatgtgttagagaggaccaatcagca
gtgtcactgagactgtattatcttagtaacggaagtgccagacttgccttctggatacaa
ggaagggaatacatgcttcctgttggtgttatgctaaaggcattagctgacaccacggac
catgaaatctttgcgtgcttgacgtcttgttatgatgataattacgattgcgtaaaaggc
tctgttggctcccagcttgttggagaacgagcaaaaattattcttgatgaggttcaggac
ctgtctctttttactcataaacagtgcctgcaacacatcggggaacactttcaacctgtt
atgattggactggagaatgaaagtccctctgttgttgctgctgctgttttgaaggactac
atatttgttcatcttgataacaatcatgacaaattcaacttgctcatatttatggtgcag
aagcttttttctctggtagatcatacttctatgccagacaatccagattctttgcaaaat
catgaagttttgttgcctggtcacttgatcaccatttacctcaaggaaaagctacaagag
tggttgctcaagacgaaaaatctccttcaagatgaagctaataacagcaataaatttgac
atcaacagcttagctgacatcaagaagcttatcgaaaaaaattctcctaaacagatcagc
tcagctattgataacatgctgaagaccggaacactgcttacccaatctgggctggatttg
cagcagagagctggtatgacagttcaggcagagaggctaaattttctccgattcctttca
cactttcgagctgtacatcgaggctctgcatttgctggtcttcgcactacaactgtgcgg
aaactgcttcctgaatcctggggttttctctgccctgttcacacacctgatggggagccc
tgtggtttactgaaccatatgtcttcttcttgccgtatcacttcatactacgataacaag
ggaaatgtcagagacttcctgaaaactaggatgtcaattctgagtgttcttgttggtgtt
ggaatgacaccctcgctgccaaagcttgtgcaggctggtcctcctaaagttctttctgtt
cttttagatggtcgtgttgttggttcaataccatctgacctagttgaaaaggcagtcaca
cacatgcgaagattaaaattgtcagcaacagcacagattcctgaggatctcgaggtggga
tatgttcctttgagcatgtgtggggcataccctggcttattcctgttcacatctccttca
agatttgttcgtccagtcagaaatatctcgatccctcctgaagagggcaacatggttgaa
cttatcggaccctttgaacaggtctatatggaaataagctgtcctgatggtggaggtggt
gggaggaagaatatgtttcctgcaactcatgaagaaattcacccaactgggatattgagt
gttgttgctaatcttacaccttggtcagatcacaatcaaagccctcgtaatatgtaccag
tgccagatgggaaaacaaaccatgggattcccttctcaagcattacacagtcgtgctgat
caaaagctttatcatcttcagactcctcaaacacccattgtacgcacaaaggcatatgaa
aagtaccacattgatgagtttccattaggaacaaatgctattgtggcagttttggcttat
tcaggatatgatatggaggatgccatggtcttgaataaatcatctgtggaacgtgggatg
tttcatggtcacatatatcagacagaaacaatagaccttactgaacagagaagcaattct
ggtcgtggacagagaatatttagaagaagcaacctagacaagtcatctcagcatctggtt
gattctgacggtcttccatatgttgggcagaggataaggccaaatgaaccatactgcagc
atctataatgagataacaagttcaacatcaagcaccaagttaaaaggatctgagtccgtt
gttgtagactatgttgctgttgatgtgaaaaacaagaataacttacagaaggttaatata
cgtttccgacgtcccagaaatcctataattggtgataaatttagcagtagacatggccag
aaaggtgtatgctctcaactctggccagatattgatatgccattcgcaggactcactgga
atgcggccagatcttattatcaaccctcatgcttttccgtcaagaatgacaattgggatg
cttttagaatctattgctgctaagggtggtgccttgcatgggaaatttatggatgcaact
ccttttacgagcttgctgaagaagggaaatgaaggacaggagtctgaatcaagttcactg
gttgatgaacttggctcaatgttgactgcttatgggttcaactaccatggttcagaagta
ctgtacagtggagtttatggaactgaactaacatgtgaaatattcattgggcctgtttat
tatcaacgactccgacatatggtatctgataaatttcaggtacggtctactggaacggta
gatcaaataaccagacaacctattaaaggaaggaagcgtggtgggggtatccggtttggg
gaaatggaaagagattcccttcttgcccatggtgcagcatatctgttgcatgacaggctt
catattagttctgatcatcacgttgctgatgtgtgctctatttgcggaagcctcttgaca
acatcactcatcccaacaaagcaacgagcaatccgggagatcattggtctgccacccggt
aggatccccaaaaaagtcatatgtgttgcttgccagacaagtaagggaatggagacagtt
gcaatgccttatgtctttcgatatttagcagcagagttggcagccatgaatataaaaatg
atcctacagttgagtagtggagcagaagcttaa
DBGET
integrated database retrieval system
