Coffea arabica (coffee): 113719499
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Entry
113719499 CDS
T11342
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-2
KO
K03265
peptide chain release factor subunit 1
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113719499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113719499
03012 Translation factors [BR:
carb03012
]
113719499
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113719499
Translation factors [BR:
carb03012
]
Eukaryotic type
Release factors
113719499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
113719499
NCBI-ProteinID:
XP_071928333
UniProt:
A0ABM4W971
LinkDB
All DBs
Position
11e:49671192..49674453
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AA seq
447 aa
AA seq
DB search
MFASVLSQSAMADAHEIDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKM
LGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVT
IDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHK
FSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPSTSQPNVSGLILAGS
ADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGK
YFEEISQDTGKYVFGVDDTLKVLEMGAVETLIVWENLDVTRYTLKNSSTGEVLVKHFNKE
QEADQNNFRDPASNSDLEVEDKISLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGI
GGILRYQLDVRAFDDLSDEGEVYDDSE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccagcgtactgagtcaatctgcgatggctgatgctcatgaaattgataagaat
attgagatatggaagattaagaaactcataaaagcacttgaggcagctcgaggtaatgga
acgagcatgatttctcttattatgcctccacgtgatcaaatatcccgagtcactaagatg
cttggagatgaattcggaactgcatctaacattaaaagtagggtgaaccgacaatctgtt
ctggctgcgattacatctgctcagcaaagactaaaactttacaataaagtaccacccaat
gggcttgtgctttacactggaactatcgtgactgacgatgggaaggagaagaaggtcacc
attgattttgagccttttagacctatcaatgcctctttgtatctctgtgacaacaagttc
catacagaagcgctgaatgaacttctagaatctgatgacaagtttggcttcattgttatg
gatggtaatgggacactctttggaactttgagtggcaatacaagggaggtccttcacaag
tttagcgttgacctccccaagaagcatggaagaggagggcagtcagctctccgttttgct
cgtcttcgaatggagaagcgccataactatgtcaggaagactgcagaactggctacccag
ttctatataaatccgtcaacaagtcagcccaatgtctcgggactaattcttgctggatca
gctgactttaagaccgaacttagtcagtctgacatgtttgatccccgtcttcaggcaaaa
attttgaatgtggtggacgtctcttatggtggtgaaaatggttttaatcaggcaattgag
ttgtcatctgaaatcttgtccaatgtcaagtttatccaggagaagcgtttgataggcaaa
tatttcgaggagataagtcaggatactgggaagtacgtttttggtgtggatgacacatta
aaagttcttgagatgggtgctgttgagactctcattgtgtgggaaaacctggatgtgact
agatatactctaaagaatagttccacaggtgaagttcttgttaagcactttaataaggag
caagaggctgatcagaacaactttagggacccagctagtaattctgacctggaggttgag
gataagatctccttgcttgagtggtttgctaatgagtataaacggtttggctgcagtctg
gagttcgtcaccaacaagtcacaagagggatctcagttttgtagaggttttggaggaatt
ggagggatcttgcgataccagcttgatgttcgagcttttgatgacctgtctgatgaagga
gaagtttacgatgattctgaatag
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