KEGG   Coffea arabica (coffee): 113719571
Entry
113719571         CDS       T11342                                 
Name
(RefSeq) uncharacterized protein
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
carb  Coffea arabica (coffee)
Pathway
carb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113719571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:carb03041]
    113719571
   03032 DNA replication proteins [BR:carb03032]
    113719571
Spliceosome [BR:carb03041]
 Complex A
  U1 snRNP components
   Sm proteins
    113719571
  U2 snRNP components
    113719571
 Complex B
  U1 snRNP components
    113719571
  U4/U6.U5 tri-snRNP components
    113719571
 Complex C
  U2 snRNP components
    113719571
DNA replication proteins [BR:carb03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     113719571
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 113719571
NCBI-ProteinID: XP_027100595
UniProt: A0A6P6VD59
LinkDB
Position
11e:52159036..52162747
AA seq 107 aa
MSRPMEEDGVKNEEEEFTTGPLSILMLSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVL
ENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq 324 nt   +upstreamnt  +downstreamnt
atgagccgcccgatggaagaggatggtgtgaagaatgaggaagaagaatttacaactggg
cctctatctattttgatgttgagtgtcaaaaataacactcaggtgctcattaactgtcgg
aacaacagaaagcttcttggtcgcgtgcgtgcctttgacaggcactgcaatatggttctg
gaaaatgttagagagatgtggactgaggtgcccaagacagggaaaggcaagaaaaaagct
cttccagttaacaaggacaggttcattagtaaaatgttccttcgcggggattctgtaatc
attgttctgcgtaatcccaagtaa

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