Coffea arabica (coffee): 113719605
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Entry
113719605 CDS
T11342
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
113719605
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113719605
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113719605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_16
zf-ANAPC11
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-C3HC4_3
zf-RING_Vps41
zf-C3H2C3
PHD_NSD
VPS18_RING_C
Prok-RING_4
zf-HC5HC2H_2
PHD
Motif
Other DBs
NCBI-GeneID:
113719605
NCBI-ProteinID:
XP_027100648
UniProt:
A0A6P6VCG5
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All DBs
Position
11e:complement(30740722..30747330)
Genome browser
AA seq
303 aa
AA seq
DB search
MEDRKSENNSINQEENPSTIPVNNSAGNSNNNDTERGGDGRRQRTPFTDLSQEDADLALA
RTLQEQERAYMMLRMNVGEGSDYGSWEGGSYGHVDDEDDDFDDPSEEEYDGSEVEEDENE
EEEEDAFDVNAQDEEEEDDSQNVEIDPSAYSSDEAYARALQDAEEREMAARLLSMAGINE
MVIGEADDEEEDDGNSQDAWEEVDPDELSYEELLALGEVVGTESRGLSADTIASLPAMSY
KSQCTEAGSTDSCVICRLDYEEGDRLTVLSCKHSYHPDCINNWLKINKVCPFCSAEVSTS
GNS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcgtaaatccgaaaataattccatcaaccaagaagaaaaccctagcactatt
ccagttaataattctgctggtaacagtaacaataacgatacagaacgaggcggcgatggc
cgccggcagagaacgccgttcaccgacctcagtcaagaagacgccgatcttgccctagcc
cggactcttcaagaacaggagagagcttatatgatgttaagaatgaatgttggtgaggga
agtgattatggaagttgggaaggtgggagctatgggcatgtagatgacgaggatgatgat
tttgatgatcccagcgaagaagaatatgatggcagtgaagtagaagaggatgaaaatgag
gaagaagaagaagatgcatttgatgttaatgcacaggatgaggaagaggaggatgacagc
cagaatgttgaaattgatccgtctgcttattcaagtgatgaagcctatgctcgagcattg
caagatgcggaagaaagggaaatggctgctagattgctgtccatggctggaataaatgaa
atggttattggtgaagctgatgatgaagaagaagatgatggtaattctcaggatgcatgg
gaagaagttgatcctgatgagctatcatatgaggaattgcttgccttgggtgaggttgtt
ggaactgagagcaggggtctttctgccgacacaattgcctctttgccagcaatgagctat
aagtctcagtgcacagaggctggaagcactgattcgtgcgtaatttgtaggttggactat
gaggaaggtgacagattgacagtgctttcttgcaagcattcttaccacccggattgtata
aacaattggttaaagataaataaggtttgtccgttctgcagcgctgaggtctccacttcg
ggaaacagctag
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