Coffea arabica (coffee): 113722179
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Entry
113722179 CDS
T11342
Name
(RefSeq) la-related protein 6B isoform X1
KO
K15191
La-related protein 7
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
113722179
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
113722179
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GFIT
Motif
Pfam:
La
RRM_1
PAM2
SUZ-C
Motif
Other DBs
NCBI-GeneID:
113722179
NCBI-ProteinID:
XP_071939729
UniProt:
A0ABM4X6U4
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Position
3e
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AA seq
546 aa
AA seq
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MMDASAAASTSSSSSAGADYLPETLSRSYSSSLLDHDRPLHRFKSSSLSSSPSDPCLYKS
ASLSKLNARAPEFVPRISISSAAASPSSSPSLLSPSVSSPSLSSLSSSCGNLLSLVQSEQ
QSDLAATFVVPRPPGVPSLVHVFNSNGASSSASSRAVFQLTSSSLDTNLASALGYPSQLQ
LYGVAAPGLGGFLNQQQDLSVLAHSSSDAFDPSKIGLSEEIALKIINQVEFYFSDINLAT
TGFLYKIMVKDPEGFVPISVIASIKKIKTLTKSQSQLASVLKGSSKLVVSEDGKKVRRLH
PLTELDMEDVQSRIIIAENLPEDHCHQNLLKIFSAVGSVKSIRSCQPSGPTVTSTSRAAK
GDPVNFSNKLHAFVEYESVELAEKAVLELNEGNWRNGLKVRLLLKRSPKAAQARDKKAGH
EGEYSFKDEDGFGPEHIQQHEKCLDDFVQPPNEPMWEEHGNNKEGGLRKSRSREFREVNE
NRGWGKGRGRPAYNSNNRGNHPGVTSNVPLNIEQPTAAKQPPVPRMPDGTKGFSMGRGKP
VAVRIA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgcttcggcagctgcttcgacatcgtcgtcatcatcagctggagctgattat
cttcccgaaaccctaagccggtcctattcatcctctctcctcgatcacgaccgtccactc
catcgcttcaaatcttcttccttatcctcatctccctccgatccatgcctctataaatcc
gcctccttgagtaagctcaacgcccgcgctcccgaattcgttcctcgcatctcgatttcg
tccgccgctgcgtctccttcgtcttcgccgtctctcttgtcgccctctgtatcttccccc
tccttgtcttccttgtcgtcttcctgcgggaacttgctgtccttggttcagtctgagcag
cagagcgatctcgccgctactttcgtcgttccccgccctcctggagttccctccttggta
catgtgtttaattccaatggggcttcgtcttcggcctcctccagagctgtctttcagctg
acgtcgtcctcgctcgacaccaatttggcctccgccttggggtacccttcgcagctccaa
ttgtacggtgttgctgctcctggacttggaggctttctcaatcaacagcaggacctttct
gtcttggcccactctagttccgatgcttttgatccctccaaaattggcctatctgaagag
attgctctcaaaattatcaatcaggtggagttttatttcagtgatataaatctggccact
actggttttttgtataaaattatggttaaagatcctgaaggatttgtaccaatatctgtc
attgcatcgataaagaagatcaaaactctcactaaaagtcaatctcagcttgccagtgtc
cttaagggctcatcaaagcttgttgttagtgaggatggaaaaaaggtcagacgcctgcat
ccgctgactgaattagacatggaagatgtgcaatccaggataatcattgctgaaaatctg
ccggaggaccactgtcaccagaatttgctgaagattttctcagcagtgggaagtgtaaag
tccattcgaagttgtcagcctagtggaccaacagtaacatctacatctagagctgcgaaa
ggagatcctgtgaacttcagtaacaagttgcatgcatttgtggaatatgaatcagtagaa
cttgctgagaaagcggttttggagctaaatgagggtaactggaggaatggtctcaaagtg
cggttactgcttaaacgctcacccaaagctgctcaggcacgtgataaaaaagctggtcac
gagggcgagtacagcttcaaggacgaagatggatttggaccagagcacatacagcaacat
gagaaatgtttggatgattttgtgcaaccaccaaatgagcctatgtgggaggaacatggc
aacaacaaggaaggtggactgagaaaaagcagaagtcgtgagtttcgcgaagttaatgaa
aatcgtggttggggaaagggacgtggacgccctgcatataattccaacaatcgtggaaat
catccaggggtaacttcaaatgttcccttgaatattgagcagccaactgcggctaagcag
cctccagtgccacggatgccagatggaacaaaggggttctccatgggtcgtggaaagcca
gttgctgtcagaattgcttga
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