Coffea arabica (coffee): 113722267
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Entry
113722267 CDS
T11342
Name
(RefSeq) long chain acyl-CoA synthetase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00061
Fatty acid biosynthesis
carb00071
Fatty acid degradation
carb01100
Metabolic pathways
carb01212
Fatty acid metabolism
carb04146
Peroxisome
Module
carb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
113722267
00071 Fatty acid degradation
113722267
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
113722267
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
carb01004
]
113722267
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
carb04147
]
113722267
Enzymes [BR:
carb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
113722267
Lipid biosynthesis proteins [BR:
carb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
113722267
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of breast milk
113722267
Exosomal proteins of breast cancer cells
113722267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
113722267
NCBI-ProteinID:
XP_027101478
UniProt:
A0A6P6VET7
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Position
2c:complement(14490916..14506655)
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AA seq
660 aa
AA seq
DB search
MKMFAAKVEEGREGRDGQPSVGPVYRNLIARHDFPPTDPNLSTAWEIFRASVEKYPRNRM
LGWREFLNHQWGPYVWKTYEEVYQETLCAGSALRACGIQPGARVGIYGSNCPQWIVAMEA
CGSQSLICVPLYDTLGPGAVDFIIDHAGIEFVFIQDKKVKELLSSDCKHARQLKLIICFT
SLTEEEKNRAASIGVKSYSWNDFLYMGKDNPSEVLPPQPFNICTIMYTSGTSGSPKGVIL
THENISTCIRGVDIFMEQFEDKMTVNDVYISFLPLAHILDRMIEEYFFHKGAAVGYFHGD
ISELQDDLMELKPTFLAGVPRVFERVREGVLKALEELNPVRRKIFGMLYNYKLKWMKLGY
KQKDAFPIADLLAFRKVKARLGGRVRLIISGGAPLSSEVEEFLRVTSCAFVLQGYGLTET
SGLAAVGFPDEMCLIGTVGSAFVYNEVRLEEVPEMGYHPLGDRPRGEICVRGKMVFAGYY
KNPELTRETIKDGWFYTGDIGEMSENGAIRIIDRKKNLIKLSQGEYIAVEYLEKVYCVSP
TIEDIWVYGDSFKSMLIAVVVPNEENTVKWAREIGYRDSFSGLCSLNQLQDHILQELKST
AQRNKLRGFEHIKGIILEPQPFELQKDLVTPTLKKKRDQLLKHYKGGIEDLYKKLAAVKR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtttgccgctaaggtggaagaagggagggaaggccgcgacggccagccgtcg
gttggccccgtatatcgaaatctaatagcccggcatgactttccgcctactgatcctaat
ttatccacagcttgggaaatatttagggcctcagttgaaaaatatccaagaaataggatg
ctaggatggcgtgaatttctcaatcaccagtggggcccttatgtctggaaaacatatgaa
gaagtgtaccaagaaactctgtgcgctggttcagcgctacgagcatgcggaattcaaccc
ggcgcccgggtaggaatctacggatcaaattgtccgcagtggattgttgcaatggaggcc
tgcggttcccagagtttaatttgtgtacctctctacgatacgcttggaccaggagctgtt
gattttataatagatcatgcaggaattgaatttgttttcatacaggataagaaagtgaaa
gaacttttgagttctgattgcaaacatgctcgacaactgaagttgataatttgcttcaca
tcattgacagaggaagagaagaacagagcagcctccattggagtgaaatcatattcttgg
aacgattttctttatatgggaaaagacaacccctcagaggtcttgccaccacagccattt
aatatctgtacaataatgtacactagtggaaccagtggaagtccaaaaggtgttatattg
actcatgaaaacatttcaacatgcatcagaggagttgatattttcatggaacaatttgaa
gataagatgacagtgaatgatgtgtacatatctttcctccctcttgctcacatccttgat
cgtatgattgaggaatactttttccacaagggtgctgctgttggttactttcatggggat
atcagtgagctacaggatgatttaatggagttgaagccaacttttctcgccggagtacct
cgagtttttgaaagagtgcgtgaaggggttctaaaagcacttgaagaactcaatccagtg
aggaggaaaatttttggcatgctttacaactacaagcttaagtggatgaaactaggctac
aaacagaaagatgcatttccaatagcagatcttctggcttttaggaaggtcaaggccagg
ttaggtggcagggttcgcctaataatttctggtggtgcacctctaagcagtgaggtggaa
gaattcttgcgggttacctcgtgtgcttttgttttgcaaggctatggcttaacagagacc
agtggattggccgctgttggctttcccgacgaaatgtgcttgatcggaacagttggttct
gcattcgtatataatgaagtgcgcctggaggaagttccagaaatgggctaccatccactt
ggagatcgtcctcgtggtgagatttgtgtcagagggaagatggtttttgcgggatactac
aagaacccagaattaacaagagaaactataaaagatgggtggttctacacaggtgacata
ggggagatgtcagaaaatggcgctataagaattatcgatagaaagaaaaatctaattaag
ctatctcagggagaatacattgcagttgaatatctggaaaaagtctattgtgtttcgcca
acaattgaagatatctgggtctatggggatagcttcaagtcaatgctgattgctgttgtt
gtaccaaatgaggagaacacggtaaaatgggcacgggaaattggctatcgagattccttt
tctggattatgttcccttaaccagctgcaagaccatatccttcaggagcttaagtccaca
gcacagagaaacaagctgagaggctttgagcatatcaaaggaatcattctggaaccccaa
ccttttgagctgcaaaaagatttggtgactccaactttgaagaagaaaagagatcagtta
cttaagcactacaaggggggaattgaggacctgtataagaaactcgctgctgttaaaaga
tag
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