Coffea arabica (coffee): 113722765
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Entry
113722765 CDS
T11342
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
113722765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113722765
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
113722765
Membrane trafficking [BR:
carb04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
113722765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
113722765
NCBI-ProteinID:
XP_071901730
UniProt:
A0ABM4U372
LinkDB
All DBs
Position
4c:4619143..4629856
Genome browser
AA seq
1013 aa
AA seq
DB search
MANKLMLLIFVVGFALCVESKYMVYNTGAKIVPDKLNVHLVPHSHDDVGWLKTVDQYYVG
SNNSIQGACVQNVLDSLIPALLADENRKFIYVEQAFFQRWWRDQSPATQKIVRQLVDAGQ
LEFINGGWCMHDEAATHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLG
AELGFDSFFFGRIDYQDRAKRKAEKALEVVWQGSKSLGSSAQIFAGAFPENYEPPSGFYF
EVNDDSDIVQDDMNLFDYNVQDRVNDFVAAAFSQANITRTNHVMWTMGTDFKYQYARTWF
RNMDKLIHYVNEDGRVNALYSTPSIYTEAKYASKESWPLKTDDYFPYADRINAYWTGYFT
SRPAIKHYVRILSGYYLAARQLEFFKGRNEAGPSTDSLGDALGIAQHHDAVTGTEQQHVA
NDYAKRLSIGYNEAEDVISTSLAYIAQSSSESGLKLQQCPLLNISYCPPSEVNLSPGKKL
VVMIYNSLGWKRSEIVKIPVVSANVIVQDSTGKEIESQILPVVDAAMALREFYATANVGK
SPVGGPLYWLAFKAEVPPLGFSTYTVSSGKRAATTSVREKFYRSDGNQNDAIEVGPGNLK
LVYSGSDGKLTGYINGKNMVKSSLEQSYSYYVGDDGTKDVAPVVAQASGAYVFRPNSTFP
IQSQEKIPITVLRGPLFDEVHQNVNSWIYQITRVYKEKQHAEVEFIVGPIPINDGLGKEV
VTQLTTTIKNNKTFYTDSNGRDFLERIRDYRSDWNLQVNQPVAGNYYPINLGIYMKDKDT
EFSILVDRSVGGSSIFDGQLELMLHRRLLVDDSRGVAEALNETVCIPSACKGLTVQGKFY
FRIDPLGEGAKWRRSFGQEIYSPLLLAFSEQDGDEMTNFKVPTFTGIDPSYSLPDNVALI
TLQELANGEVLIRLAHLYEVGEDKDLSVPARVELKKLFPNKQIIQNTETSLSANQKREDM
EKKRLVWSAEGSNHKSQRVSRGGPVDPIKLVVELAPMEIRTFLINFSKKLSTL
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaagttgatgctgctgatttttgttgtgggttttgctttgtgcgtggaatca
aagtatatggtctacaataccggtgccaaaattgtgcctgacaagcttaatgttcattta
gttcctcattctcatgatgatgttggatggctcaaaactgttgatcagtactatgttggt
tccaataattcaatacagggtgcttgcgtgcaaaatgtgctggattctctcattccggca
ttactggcggatgagaatcgaaaattcatttatgttgaacaggccttcttccagagatgg
tggagggatcagagtcctgcaacgcagaagatagtcaggcaactagtcgatgccggccaa
ctagagttcataaatgggggctggtgtatgcatgatgaggcagcaactcattacattgac
atgatagatcagacaacattaggtcacagatacatcaaggagcagttcaatgtgactcca
agaattggttggcagattgatccatttggacattctgctgttcaggcctaccttttgggg
gcagagcttggatttgactcttttttctttggacgcattgactatcaagacagagcaaaa
cggaaagctgagaaggctcttgaagttgtctggcagggttctaagagtttgggttcttca
gcacagatatttgctggtgctttcccagagaattatgaacccccaagtggtttttacttt
gaagtaaatgatgattctgatatcgtgcaggatgatatgaatttgtttgattacaatgtt
caagatcgtgtgaatgattttgttgctgctgctttttcacaggctaatattactcgaaca
aatcatgtcatgtggaccatgggaacagatttcaagtatcagtatgctcggacatggttt
cggaacatggacaagctcattcattatgtgaatgaagatggccgcgtcaatgcattatat
tcaacaccatcaatttatactgaggcaaaatatgcttctaaggagtcctggcctcttaaa
actgatgattatttcccatatgcagaccgcattaatgcttattggactggatattttacc
agcagacctgcaattaaacactatgttagaatcttgagtgggtactatttggcagctagg
caactcgaatttttcaaaggaagaaatgaagctggaccaagcactgactcattgggtgat
gcattagggattgctcaacatcatgatgctgtcactggaacagaacagcaacatgtggca
aatgactatgccaaacgtctatcaataggttacaatgaggctgaagatgtaatttctact
tcactcgcttatatagcacaatcatcatcagagtctggacttaaattacaacagtgtcca
cttctgaacataagttattgtcctccatctgaagttaatttatctcctgggaaaaaatta
gtggtcatgatctataactccttggggtggaaaagatctgagattgtgaaaattcccgtt
gtcagtgcgaatgtcattgttcaagattccactggaaaagaaatcgaatcacagatcctt
cctgtagttgatgctgcaatggccctacgggaattttatgcaactgcaaatgttggaaaa
tcccctgtaggaggccccctatattggcttgcttttaaagcggaggttcctcctctaggc
tttagcacatacactgtcagtagtggtaaaagagcagctactacttcagtaagggagaag
ttctacagatctgatgggaatcaaaatgatgctattgaagtagggcctgggaatttgaag
cttgtatactctggaagtgatggaaaactgactggatatattaatggcaaaaacatggtc
aagtcctctctagagcaatcttatagttattatgttggagatgatggtactaaggatgtt
gcacctgtggtggctcaggcttctggagcatatgttttccggcctaactccacatttccc
atccagtctcaagaaaagataccaattacagttcttaggggaccgctctttgatgaagtt
catcagaatgtaaattcgtggatatatcagattacacgagtctacaaggaaaagcagcat
gctgaggttgagttcattgttggccccatacccattaatgatggactcggcaaagaggtt
gtaacacaacttaccaccaccatcaagaacaataaaacattctatacggattctaacggt
cgagatttccttgaacggattcgggactacagatctgactggaaccttcaagtgaaccag
cctgtggcaggaaactattacccaatcaatcttggaatttatatgaaagataaggacacc
gagttctcaatcttggttgatagatctgttggaggatctagcatttttgatgggcaattg
gaactgatgcttcacaggagactgcttgttgatgatagtagaggcgttgcagaggcatta
aatgaaacagtctgtattcctagtgcatgcaaagggttaactgttcaaggcaagttctat
tttaggattgatccacttggggagggagctaagtggcgtcgatcatttggacaggagata
tactctccacttcttctagccttcagcgagcaggacggagatgagatgaccaattttaaa
gttccaacctttacaggaattgatccttcctatagtttacctgataatgtggcattgata
actctccaggagcttgcaaatggagaagttttaattcgcttggctcatttatacgaggtt
ggagaagacaaggacctatcagtaccagcaagggtggagttgaaaaagttatttcccaat
aaacagattattcaaaataccgaaacgagcttatctgctaaccagaagagggaagacatg
gaaaagaaaagactagtttggtcagcagaaggttcaaatcataaatcccaaagggtttca
agagggggacctgttgatcccattaagttggtggtcgagctagctccaatggaaatccgc
accttcttgatcaacttcagcaaaaagttgtcaactctgtga
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integrated database retrieval system
