Coffea arabica (coffee): 113722808
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Entry
113722808 CDS
T11342
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH17-like isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113722808
Enzymes [BR:
carb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113722808
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Meiosis-specific proteins
Others
113722808
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
113722808
NCBI-ProteinID:
XP_027101828
UniProt:
A0A6P6VFR5
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Position
7e:2458953..2468088
Genome browser
AA seq
1212 aa
AA seq
DB search
MDNYTLKSVLDLPAPFHSIYGFRYFNSLQSECFSACYLSDINMVISAPTGSGKTVLFELC
ILRVFSRFISAEEKLIHLKGTMKTVYVAPSKALVQEKLHEWNQKFGSWGINCLELTGDNE
HYNMRNIQDADIILTTPEKFDAVTRYRIKDGGLGFFGDIALVLIDEVHLLNDPRGAALEA
IVSRIKMLARKTEMKSSPLAHVRFLAISATIPNIDDLAEWLMVPNQGIKRFGEEMRPVKL
TTKVLGYTPAKNDFLFEKRLQNYIFDILMQYSRGKSALVFCSTRKGAQEAAQRLAQIAMT
YGHSNPFTKSREQEERLRDASLSCSDKQMQSYILYGVGYHNGGLSMKDRNLIEGLFLNGD
LQILCTTNTLALGVNLPAHTVVIKSTQHFNKEKGKYMEYDRSMILQMCGRAGRPPFDDTG
TVIIMTRKETVHLYENLLNGCEMVESQMLPCMTEHLTAEIVQLTISDITKAIDWMKCSYL
YVRMKKNPEIYSVKKGLPANRIEKHMQEICVQKINELSRYQMIWTDEDGFLLKPLEPGKL
MTKYYLKFDTMKHIMLAPANCSIEDALHVICRAEEFAWIQLRRNEKRLLNDINIDKDGRL
RFHILDDKGKVKKRVQTREEKIFILANDCLTGDPLVHDLSMSQDMNSTCANGCRIAKCMK
DYFIHKKNYKGALNSSLLAKSLHQKLWDDSPYLLKQLPGIGLVTAKALHSMGVNSFETFS
GADPRKIEIVTGRKFPFGNHIKESLLSLPPKVEMKFEETTCQKQGKFQLVVTLTRLSESA
QLTKRHYADMIVSIEDDNIILFHEKIRVDEFLSPYSAIILLPSHHQGKLTVNADLMFEEF
LGIDIHQSIIIRKENDFNAAHKHASKYAYTSQHKDVCIIKDGNDCPSQALAGVPNSNESK
EPADNMPTFRLLDEDSDEGASRVDTEDDECKIITEKTVFDHIREKAKTFPALEISNNACS
PSLETLTLIRKRTREKQLELDNSFEILEEKGTSKDSHEILVIPTAESGDLEPFVDKDATP
GNFLVSNTGNCRPVREDFEPETLDEGSIFDHIRKKAKTFPLLGNLKTTEFKNRSNHFNSG
NEGTEVRSLYEAPQDPVIISHPDAMRRIPTAKGVTEQEDFLLSGNSRDIGDKIAIDSKAT
LNISKEARSNEEPAPGIPLVRRLVKPVACTESNQPRPSSQALLHRQCSLFVKSGEVKKEN
SFLGFESVFSFL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggataactacacgctgaaatcagtgttggatttacctgctccttttcattcaatctat
ggtttcagatactttaactcattgcagagtgaatgcttctccgcttgttacctttcggac
ataaacatggttatttcagctcctactggaagtggaaaaacggtgctctttgagttgtgc
atcctgagggttttttcgaggttcatctctgcggaggaaaaactgattcatttaaagggg
acaatgaaaaccgtctatgtagctccatcaaaggctttagtacaagagaaacttcatgag
tggaaccaaaagtttgggtcatggggtattaattgcctggaactgactggtgacaatgaa
cattacaacatgaggaacatacaggatgcagacattattcttaccacccctgagaagttt
gatgctgtaactcgttatcgcataaaagatgggggcttgggcttttttggtgatatagcc
cttgtgcttatagacgaagttcatctgttgaacgatcctcgtggagcagctttggaagca
atagttagtcggatcaaaatgcttgctcgcaaaactgaaatgaaatcaagtcctctagcc
catgtccgctttcttgctatatctgctaccattccaaatattgatgatcttgctgaatgg
ttaatggttcccaatcaaggaattaaaaggtttggggaagaaatgaggcctgtaaagttg
actaccaaagtcttgggatacaccccagcaaaaaacgacttcttgtttgagaagcggctt
cagaactacatattcgatatattaatgcaatattctagagggaaatctgcacttgtcttt
tgctcaactagaaaaggagcacaagaagcagctcaacgactggcacaaatagcaatgacc
tatggtcattcaaaccctttcaccaaaagcagagaacaagaggaaaggctaagggatgct
tcactatcatgcagtgacaaacaaatgcaatcttacatcctctatggtgttggttatcac
aatggcggactttccatgaaggatcggaaccttatagaaggtcttttcttgaatggcgat
ctgcaaattctctgcacaacaaatacgcttgccctcggagtcaacctaccagctcacact
gtagtaattaagtcaacccagcactttaacaaggaaaaggggaaatatatggaatatgac
cgatccatgatactgcagatgtgtggaagggcaggccgtcctccatttgatgacactggg
acggttataatcatgaccaggaaagaaacggtacatttgtatgaaaatctgttgaatgga
tgcgaaatggtggaatcacaaatgcttccatgcatgaccgagcacctaactgccgagata
gttcaactgaccatctcagatataacaaaggcaattgattggatgaaatgctcatatttg
tatgtgagaatgaaaaagaaccctgagatttattcagtgaagaaagggctccctgctaac
cgcattgagaagcatatgcaagaaatttgtgttcaaaagattaatgagttatcacgctat
caaatgatctggactgacgaagacggtttcctattaaagccactagagcctggaaagttg
atgacaaaatattatctgaaatttgatacaatgaagcatattatgctggcacctgctaac
tgcagtatagaagatgcacttcacgtaatttgccgtgcagaagaatttgcctggatacaa
ctcaggcgcaatgagaagagactattaaatgacataaacattgacaaagatggtcggctc
cgctttcatatccttgatgataaaggaaaagtgaagaagcgggttcaaaccagagaagaa
aagatattcattctggcaaatgactgcctgactggggatcctttagtacatgatttatca
atgagccaggacatgaactctacatgcgcaaatgggtgtagaattgcaaagtgcatgaaa
gactactttatccataaaaagaattataagggtgcactaaattcatcacttctggcaaaa
tctttacatcagaaactctgggatgatagtccatacttgctgaaacaattaccaggcatt
gggttggtgactgctaaggcacttcactcaatgggcgtaaattcttttgaaaccttttct
ggtgccgatccaaggaagatagagatagtcaccggtagaaaattcccttttggtaaccac
attaaggagtcgttgctatctctgccaccaaaggttgagatgaaatttgaggagaccacg
tgccaaaagcaagggaagttccagctagtggtaacactaaccaggctatcagaatcggca
caactaactaaacgacattatgctgacatgatagttagcattgaagatgacaacattatc
ctgttccatgaaaagataagagtggatgaatttttgagcccatatagtgcgataattcta
ctaccaagccatcatcaaggaaaactcactgtaaatgccgatctcatgtttgaagaattc
cttggtattgatattcatcaaagcatcataataagaaaggagaatgacttcaatgctgct
cacaagcatgcatccaagtatgcttacacctctcagcataaagatgtgtgcatcataaaa
gatggcaatgattgtccatctcaagcactagctggagtgcctaattcaaatgaatccaaa
gaaccggcagataatatgcccactttcagacttctagatgaagactcagacgaaggtgca
tctcgtgtcgacaccgaggatgatgaatgcaagattatcactgaaaaaacagtatttgac
cacatacgagagaaggctaagacttttcctgctttggaaatctccaacaatgcatgttcc
ccctcactggagaccttaacactcatcagaaagcgaactcgtgagaagcaacttgaactt
gataattcctttgagatcctggaagaaaagggtacaagtaaagattctcacgagattctg
gttattccaaccgctgaatcaggtgacctggaaccattcgttgacaaagatgcaactcca
ggcaattttcttgtgagcaacacaggtaactgtcgtcctgtacgtgaagattttgaacct
gaaacacttgatgaaggatcaatttttgaccatatacgaaaaaaagctaaaaccttccca
ctgcttggaaatttgaagactactgaattcaagaataggtctaatcattttaattctgga
aatgagggaactgaagtccgtagtctttacgaagccccgcaagatcctgtgattatttca
catccagatgccatgagaagaataccaaccgctaaaggagttacagagcaggaagacttt
ctgctttctggcaactcgagagacattggtgacaaaatagctattgattccaaagctaca
ctaaatattagcaaagaggcaagatcaaatgaagagcctgctcctgggattccgttggta
agaagactagtgaaacctgtagcttgcacagagagcaatcagcctcgaccatcttctcaa
gctttacttcacagacagtgttctttatttgtgaaatcgggagaggtcaagaaagaaaat
tccttcctaggatttgaaagtgtgttttcgtttctttaa
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integrated database retrieval system
