Coffea arabica (coffee): 113722915
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Entry
113722915 CDS
T11342
Name
(RefSeq) sister chromatid cohesion 1 protein 2 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113722915
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113722915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
DUF7321
Motif
Other DBs
NCBI-GeneID:
113722915
NCBI-ProteinID:
XP_027101949
UniProt:
A0A6P6VG43
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Position
5c:42073..49817
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AA seq
641 aa
AA seq
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MFNSQCLLSKKGPLGTIWIAAHCLKRLKKDQVKQTDISSSVDRILHNEVEVVAYRILAYL
LLGVVRIFSKKVDFLFHDCHDVMRNLKDFAGGRSADESIEVMRTPCLSITLPERFELDAF
DLGVLIDQEVSSANVRASEELMLPDTVKVGEHSNDKFCWSADNSFEAYSSIYTPVKDVFS
DHLMDIDFNITPLHDVHGLKSSLENLHGVRFSLEERLEPMIFHEAEKESGVEMPSNDGCQ
TDLEQMGNHDKGAMDDIVKSFGEEESRDKLCGTKKIISNSDDGAKGCQIDEDQKKNLDSG
INVVGPEKFNDKQNVEPEEMKFPEMAPLTDQITTKHPVSITIESKFTGGSGDVAPEFIAV
RTPAAKECARVVRKRKCLFDDTVVLSNKVVKHSIDDSSDVVCKRRKAPHTSYHAWRAHKI
SNLPQSFLEPLIPWNLAVFRSLVQHKRFATRELAENAEIHVNEVIDEVPINQVLAESPVK
DRSAEQTPIAPATPVTSLRLQEVRGANGRDILEPASSFESMEKYMTRKEDQDLDASLMDE
EINSSAGDTPGKNECSVRTRKVGRYLYEKFQYQRRQKGEMRINLTQVLKGRSRKESARLF
YEILVLKTGDYIDARQEIPFGDILVLEAPELKNTVDSDAVS
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcacaatgtctactgtcaaagaaggggcctttaggcaccatatggattgct
gctcattgtcttaaacgcctcaagaaggaccaggttaagcagactgacatttcatcttcc
gtggataggattctgcacaatgaagtcgaggtggtcgcttatagaattttagcgtacctt
cttttgggtgttgtgagaatattctcgaagaaagttgactttctgttccatgattgtcat
gatgtgatgagaaaccttaaagactttgctggtggaagaagtgcagatgaatctatagaa
gttatgcgcacaccttgtctttctattactctacccgaaagatttgaacttgatgctttt
gatctgggagtcttgatagatcaagaagtaagcagtgctaatgtgagagcttctgaagaa
ctcatgcttccagatacagtgaaggtgggagagcactcaaatgacaagttttgttggagt
gcggataattcctttgaagcttattcctcgatatatactccagtcaaggatgtattttcc
gatcacttgatggacattgatttcaacataacaccattacatgatgtgcatggcttgaaa
tcaagcttggagaaccttcatggagttaggttctctcttgaagagcgtctggaaccaatg
atatttcatgaagctgaaaaagagtctggtgttgaaatgccatcaaatgatgggtgtcaa
actgatctagagcagatgggcaaccatgataaaggggcaatggatgacatagttaaatct
tttggtgaggaggaaagcagggacaagctctgtggaaccaaaaaaataatctcgaactct
gatgatggagcaaaagggtgtcaaattgatgaagaccagaaaaagaatcttgacagtggg
ataaatgttgtcggaccagaaaaatttaatgataagcaaaatgttgaacctgaggaaatg
aagtttccagaaatggcacccttaactgatcagattacaacaaagcatcctgtgtcgatc
accattgaatccaagtttactggtggctccggtgatgttgcaccagaatttattgctgtc
cgtaccccagctgctaaggagtgtgctcgggttgtgaggaagcgcaaatgtctttttgat
gatactgttgttctctctaataaagtagtcaagcattcaattgatgattcaagcgacgtt
gtctgtaaaagaaggaaagcacctcatacctcttatcatgcctggagagctcacaaaata
tccaatctccctcagagtttcttggagcctttaattccctggaatttagcagtatttaga
tctcttgtccagcacaaaagattcgctaccagagagcttgcagaaaacgcagaaatacat
gtgaatgaagtaatagatgaagttcctataaatcaagtacttgctgaatctcctgttaaa
gatagatctgcagaacaaactccaatagctcctgcaacacctgttacctcattgagattg
caagaggtccgaggagccaatggacgtgacatattagaacctgcaagctcatttgaaagc
atggagaagtatatgactcggaaagaggatcaagatttggatgccagtttgatggatgag
gagataaattcaagcgcaggagatacccctgggaaaaatgaatgttctgtaagaactaga
aaagttggaaggtacttgtatgagaaattccaatatcagaggaggcaaaaaggtgagatg
cgcataaacttaacgcaggtgttgaaaggaaggtccaggaaagaaagtgcaaggctcttc
tatgaaattctggttttaaaaacgggagattacatagatgcgaggcaggagattcctttt
ggtgacatcctcgtactggaggctcctgagttgaagaataccgttgattcggatgccgtc
agctga
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