Coffea arabica (coffee): 113723029
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Entry
113723029 CDS
T11342
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
carb Coffea arabica (coffee)
Pathway
carb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113723029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carb02000
]
113723029
04147 Exosome [BR:
carb04147
]
113723029
04090 CD molecules [BR:
carb04090
]
113723029
Enzymes [BR:
carb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
113723029
Transporters [BR:
carb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
113723029
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113723029
CD molecules [BR:
carb04090
]
Proteins
113723029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
AAA_22
AAA_21
RsgA_GTPase
ABC_ATPase
AAA_15
AAA_30
AAA_16
AAA_28
CPP1-like
FANCM-MHF_bd
Motif
Other DBs
NCBI-GeneID:
113723029
NCBI-ProteinID:
XP_027102097
UniProt:
A0A6P6VJI3
LinkDB
All DBs
Position
7e:complement(3166378..3172407)
Genome browser
AA seq
1249 aa
AA seq
DB search
MGSKKLDSTSSKNKGSFRSIFMHADNIDKLLMTLGFLGSVGDGVLMPMMLLVTSELMNNI
GDAASSVTKDFRHSINKNALILCYMAAGQWISCFIEGYCWTRTAERQASTLRARYLKAVL
RQEIGYFDLHVASTAEVIASVSSDSLVIQDVISEKVPVSLMNLSTFVGAYVAAFAMVWRL
AIVGFPFIIFLVIPGLMYGRSLMSIARRIREEYNKAGIVVEQAISSVRTVYSFVGESKTI
AEYSSALQGTLKLGLRQGLAKGLAIGSNGVVFAIWSFMSYYGSRLVMYHGAKGGNVFAVG
AALAVGGLALGSALSNVRYLSEASAAGERIMEIMKRVPKIDSDNLEGQILENVSGKVEFK
HVEFAYPSRPESIIFKDFNLEVPAGRTVALVGGSGSGKSTVIALLQRFYDPLGGEILLDG
LNIDKLQLKWLRSQTGLVSQEPALFATSIKENILFGKEDASVEEVIEAAKASNAHNFICQ
LPQGYDTQVGERGVQMSGGQKQRIAIARAIIKTPKLLLLDEATSALDAESERIVQEALDK
AAVGRTTITIAHRLSTIRNADLIAVVQNGQVIETGSHDELVEDENGFYTSLIRLQQTEKI
SQVESNASALASLSNAISDRHSTSSRRLSILSRSSSANSTTPSHRAENAAAPGDQVFSVP
SFRRLLAMNLPEWRQATAGCISAVLFGAIQPTYALALGSMISVYFLPDHREIKKKTEIYA
LSFVGLAVASLVINICQHYNFAAMGEHLTKRIREKMLSKMLTFEIGWFDQDENTTGALCS
RLAKDANVVRSLVGDRMALLVQTISAVIIACTMGLVIAWKLALVMIAVQPLIIICFYCKR
VLLTTMTKKAIKAQQESSKVAAEAVSNLRTVTAFSSQARILRMLEQAQRGPRRQSIRQSW
FAGVGLGTSNSLMSLTWALDFWYGGKLIGEGELGAKALFQTFMILVSTGRVIADAATLTN
DLAKGSEAVGSVFAVLDRYSSIEPEDPEGHKPNKVTGHVELRDVDFAYPSRPDVIIFSGF
SLKIQAGKSTALVGQSGSGKSTIIGLIERFYDPLRGVVKIDGRDIKAYHLRSLRKHIALV
SQEPTLFAGTIRQNVAYGASEDVGEAEIIEAAKAANAHDFVAGLKDGYDTWCGDRGLQLS
GGQKQRIAIARAILKNPAILLLDEATSALDSRSEKVVQDALERVMVGRTSVVVAHRLSTI
QSCDTIAVLDKGKVVEKGTHSSLLAKGPSGAYYSLVSLQTTANSTDAIA
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaaagaaattagattcaacgtcatcaaaaaacaagggatcatttcgttccatt
ttcatgcacgcagataatattgacaaacttttgatgacccttggctttctggggtcagtt
ggggatggggttctaatgccgatgatgctgctggtgacaagcgaactcatgaacaatatt
ggtgacgcagcttcgtcagtaacaaaagatttccgtcatagcattaacaagaacgcattg
attctctgctatatggcagccgggcaatggatatcctgcttcatcgaggggtattgttgg
actagaacagcagagaggcaagcttctacgttaagggcacgatatcttaaagcagtgcta
aggcaagaaattggctacttcgatctacatgtggcgagcacagccgaagtcattgcaagt
gtctccagtgacagtcttgtaattcaggacgtcatcagtgaaaaagttccagtgtcgttg
atgaatctctcgacgtttgtgggggcatatgttgctgcgtttgcaatggtctggaggctg
gctattgttggatttccttttataatatttttggtcataccaggtctgatgtatggaaga
tctcttatgagcattgctagaaggatcagggaagaatacaacaaggccgggatagttgta
gagcaggccatttcttccgtcaggaccgtttactcctttgttggggagagtaaaactatc
gcagagtactcgtctgctcttcaggggacactgaaattggggctgcgacaaggtttagca
aaaggtttggccattggtagtaatggtgtggtgtttgcaatttggtctttcatgtcctat
tatggcagcagattggtcatgtaccacggtgccaaaggagggaatgtttttgcagtcggt
gctgcccttgccgtcggtggattggcactgggttctgccttatccaacgtaaggtacttg
tcagaagctagtgctgcaggtgaacgcatcatggaaatcatgaaaagagtgcccaagatt
gattcggacaacttggaaggccaaattctagaaaacgtctcgggaaaagttgagtttaag
cacgttgaattcgcatatccctcaagacctgaaagcataattttcaaggattttaacctc
gaagtcccagctggaagaacggttgcattggttggaggaagcggttctgggaaatccaca
gttattgctttgctgcaaagattttatgacccacttggaggtgaaatcctgcttgatggg
ctcaacattgataagctgcaactcaagtggttaaggtcgcagacggggctggtaagtcag
gagcctgctcttttcgctacaagcattaaagagaacatactttttgggaaggaggatgca
tccgtggaagaggttatcgaggcagcaaaagcttctaatgctcataacttcatttgtcag
ttgcctcagggttatgacactcaggttggtgagaggggagttcagatgtccggaggacag
aagcagagaattgccattgccagagccattattaaaacaccaaaattgctcctccttgat
gaggccacaagcgcactggatgccgaatcagagaggattgttcaagaagctctggacaag
gcagccgtcgggcgcaccaccatcaccatagcccaccgtctctccaccatccgaaatgct
gacctcattgctgtggtccagaatggccaagtcatcgagactggctcgcatgacgagcta
gttgaggatgaaaatggtttctacacgtcgctcatccgccttcaacagacggaaaaaatc
agccaagttgaaagcaatgcgagcgcactggcgtcgctgtccaatgcaatcagcgacagg
cacagcaccagcagtcgaaggctatcaatcttgagcaggtccagttcggctaactcaacc
actccgagccatagagcagagaatgcagcagctcccggggatcaagtgttttcagtaccc
tcgttcagaagattattggccatgaacctgcctgaatggaggcaagcaacggcagggtgt
attagtgcagtactgttcggcgcaattcaaccgacgtacgccttggcgctgggatccatg
atatcggtgtatttcttgcccgatcacagagagatcaagaaaaagacggagatatatgct
ctgtcctttgtggggctggcagttgcttcattggtgataaatatatgtcagcattataac
tttgcagccatgggggagcatttgacaaagaggatcagggaaaagatgctgtccaagatg
ctcacttttgaaatagggtggttcgatcaggatgagaatacaactggtgccttatgctcc
aggctagcaaaggatgccaatgtggtaaggtcattagttggggatagaatggcgctgctg
gttcaaactatttctgcagtgatcatcgcatgcactatgggcctagtcatcgcctggaag
ctagctctggtcatgatagccgttcaaccccttatcatcatctgcttttactgtaagcgc
gttctgctaaccaccatgaccaagaaggccatcaaagcccagcaggaaagcagcaaggtc
gctgctgaagccgtctccaaccttagaaccgtcaccgctttcagctcccaagctaggatt
ctccggatgcttgaacaggcccaacgaggcccccgacggcaaagcattcggcagtcatgg
ttcgccggtgttgggcttggtacgtccaacagtctcatgtcgttgacgtgggctctcgac
ttttggtatgggggtaaactgattggagagggtgaacttggagcaaaagcgctgttccag
actttcatgattctggtcagcaccggtcgcgtaattgccgacgcggctaccttgaccaat
gatctagccaaagggtccgaggctgtcgggtctgttttcgcagttttggatcggtactcc
tcgatcgaacctgaggatccagaaggccacaagcccaacaaggttacgggccacgtcgag
ctccgcgatgtcgattttgcgtacccctccaggcccgatgtgatcatcttcagtgggttc
tccctcaaaattcaggcggggaaatcaacggcgttggtgggacaaagcggctcagggaaa
tccaccataatcggcttgatcgagaggttctatgatccgctgcgcggggtggtgaagatc
gacggtcgagatataaaagcataccacttgagatcgctgaggaaacacattgcactggtg
agccaggagcccacattattcgccggcaccatacgccagaacgtcgcgtacggagcatcg
gaggacgtgggcgaggcggagatcattgaggctgctaaggcagccaatgctcatgatttc
gtcgcggggttgaaggatggatatgacacgtggtgcggagacaggggattgcaactatcg
ggagggcaaaagcagcggattgccatcgcccgggctatcctgaaaaacccggcaatactg
ttgttggacgaagcaaccagcgcacttgacagtcggtctgaaaaggtggtgcaagatgca
ctggagagagtgatggtgggaaggaccagtgtggttgtggcgcacaggctaagtacaatc
cagagctgcgatacgattgcggttttggacaaagggaaggtggtggagaaagggacacat
tcttctctgctggccaaaggtccgagcggagcttactactctcttgtcagcctccaaaca
accgccaattcaaccgacgccattgcctag
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integrated database retrieval system
