Coffea arabica (coffee): 113723030
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Entry
113723030 CDS
T11342
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113723030
03036 Chromosome and associated proteins [BR:
carb03036
]
113723030
Transcription factors [BR:
carb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
113723030
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
113723030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113723030
NCBI-ProteinID:
XP_071915033
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Position
7e:complement(3363553..3369355)
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AA seq
642 aa
AA seq
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MADGHLFNNISLGGRGGTNPGQLRVHSGGILWKKQGGGKAVEVDKSDLVGLSWMKVPRSN
QLGVRIKDGLFYKFTGFRDQDVTSLSAFFQTTCGITPEEKQLSVSGKNWGEVDLNGNNLT
FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNMQFV
GDENRPPAQVFRDKIMSMADVGAGGEESVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPFTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVDSTLSMS
EDLLRTKYKDKLEPTYKGLIHEVFTMVLRGLSGAKVTRPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYLEFQRHSAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHSLFDFISSKGLKIMNLGEAQSRDAILPVLPEDDDDAVDPHLERIKNEAGGDESDE
EDEDFVIDKDDGGSPTDDSGEGESDGSDGGDEEVPAKKKVKKEPSASKSSVSRKKAKDGN
DDVKKKKQKKKKDPNAPKRAVSAFMFFSQAERENVKKNIPGISFTEVGKVLGERWNKMSA
EEKAPYEAKARADKKRYSDEISGYKNPQAAVNIDSGNESDTA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggtcacctcttcaataatatctctctcggaggtcgcggcggcactaatcca
ggacaattaagggttcattctgggggtatcctatggaagaaacaaggcggcggtaaggct
gtggaagtggacaagtccgatttggtgggcctttcctggatgaaagtccctcgatctaat
cagcttggagttcgtattaaggatggtctcttctataaatttactggcttccgggatcag
gatgttaccagtctatccgcttttttccagactacttgtggaataacaccagaagagaag
cagctttctgttagtgggaagaattggggagaagttgatctaaatgggaataatcttacg
tttcttgttggttctaagcaagcatttgaagtatctttggcagacgttgcacaaacacaa
cttcaggggaaaaatgatgtcatgttggagttccatgtggatgatactactggggccaat
gagaaagattcgttgatggaaatcagtttccatatacctaactcaaacatgcaatttgtt
ggtgatgaaaatcgccctcctgctcaggtatttcgtgacaaaatcatgtccatggcggat
gttggagctggaggggaggaatctgtagttacatttgaggggattgctattctcactcca
aggggtcgatacaatgttgaacttcatctgtcatttttgcgtctccaggggcaggccaat
gatttcaaaattcagtacagcagtgttgttcgtctttttttgttgcctaagtccaatcag
ccatttacctttgttgttgtcacacttgatccacccattcggaagggccaaacattgtat
ccacatattgttttgcagtttgaaacagattatgtggttgatagcaccctttcaatgagt
gaagatcttctcagaaccaaatacaaggacaagctagaaccaacctacaagggattaatt
catgaggtttttacgatggttcttcgtggcttgtccggtgccaaagtcaccagacccggg
aagttccgtagctgtcaggatggttatgctgtgaagtcatcactgaaagctgaggatgga
gttctttatcctcttgagaagagctttttctttttacccaaaccacctactcttattctt
catgaagagattgattatttggagtttcaaaggcattctgctggaggttcaaacatgcac
tacttcgatttacttatcagacttaagactgagcaggagcatcttttccggaacatacag
agaaatgaataccatagtctttttgactttatcagttcaaagggactgaagatcatgaac
cttggtgaagctcagagtagagatgctatactgcctgttttaccggaggatgatgatgat
gctgttgatccacatctagagcgtatcaagaatgaggctggtggggatgagagtgatgag
gaggatgaagattttgttattgacaaagatgatggaggctctcctactgatgattctggt
gaaggagaatcagatggcagtgatggtggagatgaggaggtgcccgcaaagaagaaagtc
aaaaaggagccctctgcttcaaagtcatctgtgagtaggaaaaaagccaaagatggtaat
gatgacgttaaaaagaagaagcaaaagaagaaaaaggatccaaatgcaccaaaaagagct
gtcagtgctttcatgttcttctcacaggcagagagggagaatgtgaagaaaaatattccg
ggaatatcattcacagaggttggaaaggtccttggagaaagatggaataagatgtcagcc
gaggaaaaagcgccttatgaagcaaaggctcgtgcagacaagaaaagatacagcgatgag
atcagcggctacaagaacccacaggctgcggtaaacatcgactctggcaacgaatctgac
actgcatag
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