KEGG   Coffea arabica (coffee): 113723110
Entry
113723110         CDS       T11342                                 
Name
(RefSeq) DNA repair protein UVH3-like isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
carb  Coffea arabica (coffee)
Pathway
carb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    113723110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:carb03400]
    113723110
DNA repair and recombination proteins [BR:carb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     113723110
SSDB
Motif
Pfam: XPG_N XPG_I UBM
Other DBs
NCBI-GeneID: 113723110
NCBI-ProteinID: XP_071916453
UniProt: A0ABM4VA94
LinkDB
Position
7e:2976496..2986290
AA seq 1523 aa
MGVHGLWDLLAPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDEKGEMVRNAHLLGFFR
RICKLLYLRTKPVFIFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQIRLK
ELAAELEKQRRTNDAKGKKVATDEAQMAQETSGQSLLFTDGYNQEALDEMLAASLAAEED
EGFAAAESSSGVGIQTEEEEGADEDEEMILPTMHGKIDPAILAALPPSMQLDLLVQMRER
LMAENRQKYQRVKKAPSRFSELQIQAYLKTVAFRREIDEVQKSAAGRGVGGVQTSRIASE
ANREFIFSTNFSGDKQVLTSTGEGSKKSEQSQTAPANPSISAVNDVASKTKHTAVAGSTV
DEPQRNFENDVETYLDERGRVRVSRLRAMGIRMTRDLQRNLDLMKEIDGESVCMTKSAIE
ESTNCSSVVDIPHNSSKGIPNLATCYQDSNGMTCVDENNEESILNAGTSMEISFDDNGQH
ELGGEDIDLFAHLVAGDPVMEFSINDSLSKKQSLDSASEPEWEDGDIEVEAGTSNNKLKG
KPLLPDGMRDENDLECEDGSLGIREEASFSGEYLDIVSKGALEEEADLKEAIRRSLQDLG
DQRLVDTPDEDEKCGATAAVVSLSKNSGFIHKEVDGKMSQPPSTFNNQQHESPCHVQENT
RSPDGNIVETNSSLDGHLIPYLEGNYGTKDLLPEKACGSYPFVDPLMQDVSGNNTSHQEV
CGTPVQEKDVSPFEAQLASGTGDGIVADGLHNGFEAEAVVDGHLNRTTEIKGSSLKDLMI
DTAQQCREGEVHDCGEEHLGKDGSSYGRKEEARLEKEVLLLGEEQRELGDKQKKLERNAE
SVSSEMFAECQELLQMFGLPFIIAPMEAEAQCAFMELVNLVDGVVTEDSDAFLFGARNVY
KNIFDDRKYVETYFMKDIENELGLNREKLIHMALLLGSDYTEGVSGIGIVNAIEVVNAFP
EEDGLRRFREWIESPDPSILGKFDLQAGSSSKQIQSQVGETDMNCSDAKLSGVAARDADV
SGSVDDTQKLKQIFMNKHRNVSKNWHVPSSFPSDAVISAYSSPQVDKSTEPFSWGKPDHF
VLRKLCWEKFGWSTQKADELLLPVLKEYNKRETQLRLEAFYTFNERFAKIRSKRIKKAVR
GITGKKSLDLMDESVQDGLISKKKRRRNQDVVAGDKLEEASSGQEYADVGNEAKTTEKVN
ETELRNIGSLGRPLHPGGGSRNRLPSEENFQGRSRGVTVRKRGKARGRGGASDHPINKGG
IKSHSSEYSSSSPDDEIYSDSAQDVQVNFGEQHQVRRSRRPRKEVNYSEFNLKSDDPDWG
DESSREGSGARKVSSADLLEDLTAAVPSKINESENLDQELSWEFLEKGDGYGVGKAKEDM
GTDQLNSSPSNGIVSDTELSKEYLSVGGGFCLDEDTTDGDLQGSSKCPGKVTTFESDPSK
CSGLGEDDISKSPTRAVNPVQAERLGNLDTSYTTSTKNPDESANRDRSEVASFQEIISDD
DYGKDSSRYFRAMPNLRRKRRKT
NT seq 4572 nt   +upstreamnt  +downstreamnt
atgggcgtccacggcctgtgggacctcttggcccccgttggtcgccgcgtttccgtggaa
acccttgccgggaagcgactcgcaatcgacgcgagtatatggatgattcagttcatgaaa
gcgatgagagacgagaaaggagagatggtaaggaacgctcatttgttggggtttttccga
cgaatttgcaagcttctctacctccgaaccaagccggtcttcatcttcgatggcggcacg
cccgctcttaaacgccgtactgtgatcgcccgccgccgccagcgcgagaatgctcaagcc
aagattcgaaaaaccgccgagaagcttcttctcaatcagctcaagcaaataagattgaaa
gaactggctgctgaacttgagaaacagagaaggactaatgatgctaaaggtaaaaaggtc
gcgacagatgaagcacagatggcgcaggagacatcaggacaaagcttactgtttacagat
ggttacaatcaggaagcattggatgaaatgttggcagcatcacttgcagcggaggaagat
gaaggtttcgctgctgctgagtcatcatctggtgtggggattcaaactgaagaagaagaa
ggtgctgatgaggatgaagagatgatccttccaaccatgcatggaaaaattgatcctgct
atcttagctgccttacctccatccatgcaacttgatcttctcgttcagatgagagagaga
ttgatggctgagaatagacaaaagtatcaacgggttaagaaggccccttctagattttcg
gaattacagatacaagcttatcttaaaacagttgctttccgccgtgagatagatgaagtg
cagaaatctgctgcaggaaggggagtgggtggggtacagacttcaagaattgcttctgaa
gcaaatcgagaatttattttttcaacaaatttcagtggggacaaacaggtccttacatct
accggagaagggagcaagaaaagtgaacaaagtcaaacagcaccagcgaacccttccata
agtgctgtcaatgatgttgcatcaaaaacaaaacacactgctgtggctggatctactgtt
gatgaacctcaaaggaattttgagaatgatgtcgagacatatctggatgaaaggggtcgg
gttcgagtgagtagacttagagctatgggtattcgtatgactcgagatttgcaaagaaat
ttggatttgatgaaagagattgatggagagagtgtgtgcatgactaaaagtgcaatagaa
gaatctaccaattgtagcagtgtagttgatataccacacaattcttctaaggggatccca
aatttagcaacctgttatcaggattcaaatggaatgacttgtgttgatgagaacaatgaa
gaaagtatattgaatgctggaacttccatggagatatcttttgatgataatggtcagcat
gaactgggtggtgaggatattgatctatttgctcatttagttgcaggagatccagtaatg
gaattttctattaatgattctctctcaaagaaacaatctttggattctgcttcagaacct
gagtgggaggatggagatattgaagttgaagctggtacttcaaacaataaactgaaaggt
aagccacttctgccagatggtatgcgtgatgagaatgatttggaatgtgaggatggttct
cttggtatccgagaagaggcctccttttctggtgaatacttggacattgtttctaaaggt
gctttggaagaagaagctgatctaaaggaagcaataaggaggagtcttcaggacctgggt
gatcaaaggcttgttgatacacctgatgaggatgaaaagtgtggagcaacggcagcagtg
gttagtttgagcaagaattctgggtttattcataaagaagtggatggaaaaatgtcacaa
cctccctccacatttaataatcaacagcatgagtccccttgtcatgttcaagagaacacc
aggagtcctgatggtaacattgtggagaccaatagttctttggacggccacttgattcca
tatttagaaggtaattatggtacgaaggatcttttgcctgaaaaagcatgtggaagctac
ccattcgtagacccactaatgcaagatgtgagtggaaataatacttcgcaccaagaagta
tgtggcacccctgtacaagaaaaggatgtttcaccattcgaagcgcagcttgcttctggc
actggggatggaattgttgcagatggtttacacaatgggtttgaggctgaggcagtagta
gatggccatttgaataggacaactgaaataaaaggatcctctttgaaagatttaatgatt
gacactgctcaacaatgcagagagggagaagttcatgattgtggagaagaacatttgggt
aaagatggttcatcatatggcagaaaggaagaagctagattggagaaggaagtgctactt
ttaggtgaggagcagagagaacttggagataagcagaaaaagcttgagcgaaatgctgaa
tcagtaagcagtgaaatgtttgctgaatgccaggagttacttcaaatgtttggcttacct
tttattattgcacccatggaagctgaagctcaatgtgcattcatggaacttgtaaacctt
gttgatggtgtagttactgaggattccgatgcattcttgtttggcgcacgaaatgtctac
aagaacatttttgatgatcgcaagtatgtcgagacatattttatgaaggacatagagaat
gagcttggcttaaatcgggaaaagttaattcatatggcactgctgcttggaagtgactac
actgaaggtgtaagtggaattggcattgtaaatgctatcgaggttgtaaatgctttccct
gaagaggatggcctccgtagatttcgtgagtggattgaatcaccagatccatccattttg
ggaaagtttgatttgcaagcagggagtagctcaaagcagatacagtcacaagttggtgag
actgatatgaattgctcagatgccaagttaagtggagttgctgcacgtgatgcagatgtt
tctgggtctgttgatgacacccaaaagttgaagcagatttttatgaataagcatagaaat
gtgagcaaaaactggcacgttccttcttctttcccgagtgatgctgttatttcagcatat
tcatctccacaagtagataagtcaaccgagcctttctcgtgggggaagccagatcatttt
gttctccgcaaattgtgttgggagaaatttggatggagcacccaaaaggcagatgaacta
ttgcttcctgtattgaaggagtacaataaacgtgagactcaactgcggttggaagcattt
tacacattcaatgaaagatttgcaaaaattcggagtaagaggatcaaaaaagctgtcaga
ggtataacagggaagaaatccttggacttgatggatgagtctgtgcaagatggcctgata
agtaaaaagaaaagaagaagaaaccaagatgttgtggcgggggacaaactagaagaagct
tccagtggacaagaatatgcagatgttgggaatgaggccaagactacagaaaaagtaaat
gaaacggagttgagaaatataggatccctgggacgacctttacaccctggtggtgggagt
aggaacagattacccagtgaggaaaactttcaaggtcgaagtagaggagttactgttagg
aaaagaggtaaagctagaggtagaggtggagcaagtgatcatcctattaacaaaggagga
attaaatctcattcttcagaatattcttcatctagcccggatgatgaaatctatagcgac
agtgcgcaagatgtccaagttaattttggagagcaacaccaagtacgaagatcgagaagg
cctcggaaggaagtgaactactctgagtttaacttgaaatctgatgatcccgattggggt
gatgaaagctccagggagggtagtggagcaaggaaagtgtcgtctgcagacttgctcgag
gatcttacagcagctgttccaagcaaaattaatgagagtgaaaatcttgatcaagaactg
tcctgggaatttctcgaaaagggtgatggatatggtgttggcaaagctaaagaagatatg
gggacagatcaactaaactccagtccttccaatggtatcgtttccgataccgagttatcc
aaagaatacctgtcagtgggaggtggattttgcttggacgaagatactactgatggggac
ttgcagggatcatctaagtgcccggggaaagtgacgacatttgaatctgatccatcaaag
tgctcgggattgggggaagatgacatcagtaagagccccaccagagcagtgaaccctgtt
caggcggagagactggggaacctggatacttcgtataccacctccaccaagaatccagat
gagagtgcaaatagggataggtcggaggtagcaagctttcaggaaattatcagcgacgat
gattatggtaaggattcttcaagatatttccgtgcaatgccaaatttaaggagaaaaaga
aggaaaacttga

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