Coffea arabica (coffee): 113723122
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Entry
113723122 CDS
T11342
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113723122
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
113723122
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
113723122
NCBI-ProteinID:
XP_027102179
UniProt:
A0A6P6VGP0
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Position
7e
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AA seq
449 aa
AA seq
DB search
MGEPVSKLVCVFLCAFTIVVVPTLITAQGSGSAEEEYWRIRAEEAWNHTLKAYEANPHTV
IGAFNKQASDAVKEFLSEKNNTRRELRGKTWGGGCLATNPIDRCWRCQPNWADNRKRLAD
CVVGFGRGTTGGKNGAFYVVTDSSDDSILAPKPGTLRHAVIQKEPLWIIFQRDMVIRLTQ
ELIMQGDKTIDARGVNVHIAYGAGITIQFVKNVIIHGLHVHDIHQGSGGLVRDSVDHFGI
RTMSDGDGISIFGSSNVWIDHVSMWKCYDGLIDAVEASTAITISNSHFTDHNEVMLFGAS
DSQSKDAVMQITVAFNHFGKRLIQRMPRCRWGFIHVVNNDYTHWEMYAIGGSQHPIIISQ
GNRFIAPPDIFKKEVTKRDYAEEARWKQWTWRSEGDLFMNGAFFVQSGDPDFTKKHPEIF
DGIAPADSSQVTWITRFAGALLCRPGSPC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaccggtttccaagttggtttgtgtgttcctgtgtgcttttacaatagtggtg
gtgccaaccctgatcacggctcaaggcagtggcagtgcggaagaggagtactggcgaatc
cgagcagaggaagcctggaaccacacgctcaaggcttatgaggctaatccccacaccgtt
attggggccttcaataagcaagcttccgacgctgtaaaagaattcttgagcgagaagaac
aacacgaggagggaactgagagggaaaacgtggggaggaggctgcttggctaccaaccca
atcgacaggtgctggagatgccagccaaattgggccgacaacagaaagaggctggcagat
tgtgtggtgggttttggccgcggcaccaccgggggaaagaatggtgcattctacgtcgtc
acagactcttccgatgacagcattctggcaccgaaacccggaacccttcgccatgcagtg
atccaaaaggagccactttggatcatattccaacgcgacatggtaatcaggctcacgcag
gagctgatcatgcagggcgacaagaccattgatgctcgtggggtgaacgtccacattgct
tacggcgctggaatcaccattcagttcgttaagaacgtcatcatccacggtctccacgtc
cacgatatccatcagggctccggtggcctcgtcagggactcggtcgatcatttcgggatt
aggaccatgagcgacggagatgggatttccatcttcggatccagcaacgtttggattgat
cacgtgtccatgtggaagtgctacgacggcctcattgatgccgtcgaggcatccaccgcc
atcaccatctcaaactctcacttcaccgatcacaatgaggtgatgctcttcggtgccagc
gacagtcaatccaaagatgctgtcatgcaaatcactgttgcttttaaccattttggtaag
aggttgattcaaagaatgcctaggtgccgatggggattcattcacgtcgtcaacaacgat
tatactcactgggaaatgtatgccattggtggtagccaacatcccattatcatcagccag
ggtaaccgcttcattgctcctcccgacatcttcaagaaggaggtgacaaagagggattat
gcggaggaagcgagatggaagcagtggacgtggagatcagagggagatcttttcatgaac
ggagcattctttgttcaatctggagatccagattttaccaagaagcatcctgaaattttc
gacggcatagctcctgcggatagttcacaggtgacttggataacgaggtttgctggtgcc
cttttgtgcagacctggaagcccgtgctag
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