Coffea arabica (coffee): 113724774
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Entry
113724774 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K18735
protein SMG9
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113724774
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
113724774
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
NB-ARC
MMR_HSR1
Dynamin_N
DO-GTPase2
MeaB
URGCP_GTPase
AAA_29
RsgA_GTPase
AAA_16
AAA_30
AAA_18
AAA_17
Motif
Other DBs
NCBI-GeneID:
113724774
NCBI-ProteinID:
XP_027103454
UniProt:
A0A6P6W330
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All DBs
Position
2c
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AA seq
416 aa
AA seq
DB search
MAGGSGVASNPSTHPPSHQAAPKILLAKPGLVAAGKFSRGLVGPGGTVEDDSAAALRSRL
PSIGSLNLLSDSWDFNPDRFLPFLTDNTDFTVVGVIGPPGAGKSTILNEIYGYDPTSPGM
LPPFAIETEETKAMAKHCTLGIEPRISSERIILLDTQPVFSPPVLAEMIRPDGSSTISVI
SGESLSAELAHELMTVQLGVFLASVCHIILVVSEGVHDLSMWRLMSTVDLLKHGIPDPSS
VSFSHPHGSSLISEKENKDKIQEVGKEYMAAPVFVQTKLRDKDVNPHNAAQLRKALQQCF
KFPSSFVRLKCQNASKENSISAIKSQNDGTDSAALKLFLVPSKNRDDSPWAQYESYISVI
WKLRDEVLSMSGSSFSRTVSERDWLKNSAKIWDMIKNSAVIADYCKTLQSSGMFRR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcagggggatcgggagtcgcttcaaatccatcaacacatcctccctctcaccaagct
gctcccaaaatcctattagccaagcctggtcttgttgccgccggcaaatttagccgaggg
cttgtcggccccggcggtaccgtcgaagatgattcagcagccgcgctccgatctcgcctt
ccgtccatcggatctcttaatctcctttccgattcttgggatttcaaccccgacagattc
cttccatttctgactgacaatactgattttacggtggttggagtaatcggtcctcctggt
gctggcaagtccaccatcttgaacgaaatatatggatatgatcctacctcacccggaatg
ctgcctccatttgcaattgaaactgaagaaactaaggcaatggcaaagcactgcactctt
gggattgaaccccgaatctcctccgaacgtatcatacttcttgatactcagcctgtgttt
agtcctcctgttttggccgagatgattagacctgatggctcatctacgatctctgtgata
agtggtgaatcactatctgctgaattagctcatgaactgatgaccgttcagcttggtgtt
tttcttgcatcagtttgtcacattatcctggtggtatctgagggagttcatgatcttagc
atgtggcgcttaatgtcaacggtggacttgttgaagcatggtatacctgatccgtcttcg
gtgtccttttcgcatccgcatggctctagtctgatctctgaaaaagaaaacaaagataaa
attcaggaagtgggaaaagagtatatggcagcgccagtttttgtgcaaacaaaactgcgt
gacaaagatgttaatccgcataatgctgcacaactaaggaaggcacttcaacagtgtttt
aagttcccatcatcttttgtgaggcttaaatgccaaaatgcatcaaaggagaacagcatt
tccgcaatcaagagtcagaatgatggcacagattctgcagcactaaaattgtttctagtt
ccaagcaagaatagagatgactccccctgggcacagtatgaaagctacatttctgtgatt
tggaagttaagggatgaggttctatccatgagtggctcctcgttctcgaggacagtgtct
gagcgtgattggttgaagaattctgctaaaatatgggacatgatcaagaattctgccgtc
attgcagactactgtaaaacgcttcaaagttcgggcatgtttagaaggtag
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