Coffea arabica (coffee): 113724802
Help
Entry
113724802 CDS
T11342
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
carb Coffea arabica (coffee)
Pathway
carb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
113724802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113724802
03029 Mitochondrial biogenesis [BR:
carb03029
]
113724802
Membrane trafficking [BR:
carb04131
]
Autophagy
Autophagosome formation proteins
ULK complex
113724802
Atg1 complex
113724802
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
113724802
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
113724802
NCBI-ProteinID:
XP_027103496
UniProt:
A0A6P6VLA7
LinkDB
All DBs
Position
2c:complement(487705..492534)
Genome browser
AA seq
611 aa
AA seq
DB search
MDLQYGRFEQILTQFLLKSIHIILDSRVPSTRPYSRCREVKKSDKWFNLALGDRPSALEN
LNFWHRNLTEPIIIDIILVQEPPNSSCGYSLLPTTSGLGTFTETVIERWVVQCEYLRTMT
PQSSDVSYKKTYKKSIILLRSLFSMMRLLPAYKAFRKLSSTNQTCDFDINYKVSTFSVPF
SRTEEELMKHYSFIPVDAQQGRFAISVTYRDNLSHFNLEASTSFPPEIITDYVGSPLTDP
LRTFPSSLERRFHATPLLSRGMHSPSSVPFQRPHSWTSGLHRGVSSPQSQPLAGCPVLYR
ASYEVSSAISDTYGRKVQDCKSPAHYEAASSNDSYQLSPPFSPSPSPSPPAYLTSGNPVQ
TRFRSESAPVSIPHPIVGRSSRYISPNSSDPNRNSLPPLSPRFTKHDSSSQESPSGTRSL
RKPDSLRSAESSCGMTYLGQKVSRDAKDDSGRFSGLLSSSDSPRVGFSRSSSRLSFQDDL
DECDFSCPFIVDDVDTSESQANRNLDLRKGSEASSQAISSVRKSQDAAVGALVHMLRTAP
PLRLDSSSYASGFEKSELESIAGAGSGFVLPRKTSDALEELKAYSEMKELLLCKSGSITS
RAGSKDETSSS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcaatatgggaggtttgaacagatacttactcagtttcttcttaagagtata
cacattatattggattcgagggttccttcaacccgaccttacagccgttgcagagaagtt
aaaaagagtgacaaatggttcaatttagcattaggggaccgcccttctgcgttagagaat
ctgaatttttggcatagaaacttaacggagccgatcattattgatataattcttgttcaa
gaaccaccgaactcttcatgtggctatagtttactacctactacttcgggattgggaaca
tttaccgagacagttatagagagatgggttgttcagtgtgagtacctgaggacaatgact
cctcaatctagtgatgtttcatacaagaaaacatacaagaaatcaatcatacttttacgc
tcgcttttttccatgatgaggcttcttccagcttacaaggcctttcggaagctatcatca
acgaatcagacatgtgattttgatatcaattacaaggtctccactttcagtgttcctttc
tctaggacagaggaggagttaatgaagcattatagcttcattccagttgatgcccaacag
ggtcgctttgccatatctgttacatatcgggacaatctatctcatttcaacctagaggct
tctacatcttttccgccagagatcattacagactatgttggtagtccactcactgatcct
ctgaggacttttccatcttctttggagagacgtttccatgctacgccattattatcaaga
gggatgcactcaccttcttcggtgccctttcagcgtccacacagctggacaagtggtctc
cacaggggggtttcttctcctcaaagccaacctttggctggatgtccagttctatatcgt
gcttcatatgaggtctcatctgcaatttctgatacgtatggccgcaaggtacaagattgc
aagtctccagctcactatgaagcggcaagctccaacgactcctaccagctttctcctcca
ttttccccatctccttccccgtctcctccagcatatcttaccagtgggaatcctgtgcag
actcggtttcgatcagaaagtgcacctgtcagtattccacatcctattgttggcaggagt
tcacgatacatttctcctaattcgtctgatccaaacagaaattcgcttccacctttatcc
ccaagattcacaaagcatgattcgtcatctcaggagtccccctctggaaccagatcattg
aggaaaccagattcactcagatctgcagaatcgagctgtggaatgacatatttgggtcag
aaagtttcaagagatgccaaagatgattctgggcggttctcaggtttactttcctccagt
gattcacctcgtgtcggtttctcaagaagctccagtagattatcttttcaggatgacctg
gacgagtgtgatttttcttgtccatttatagttgatgacgtcgatacttctgaatcccag
gccaatcggaatcttgatttgaggaaaggttcagaagcttcttcacaggcgatttcatct
gtgaggaaatcccaagatgctgctgttggtgccctagttcacatgctacggacagctcct
cccttgcgtctggactctagcagttatgcttctggttttgagaaatctgaacttgagagt
attgcgggtgctggttctggattcgtcctgcctcgaaagacatcagatgcattagaggag
ctcaaggcttacagtgaaatgaaggagttgctactttgcaagagcggaagcattaccagc
agggcaggcagcaaggacgaaacatcttccagctga
DBGET
integrated database retrieval system
