KEGG   Coffea arabica (coffee): 113724889
Entry
113724889         CDS       T11342                                 
Name
(RefSeq) la-related protein 1A
  KO
K18757  la-related protein 1
Organism
carb  Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:carb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:carb03019]
    113724889
Messenger RNA biogenesis [BR:carb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     113724889
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 113724889
NCBI-ProteinID: XP_071912005
UniProt: A0ABM4UXJ2
LinkDB
Position
1e:39658267..39668086
AA seq 925 aa
MAMAENEGTGGDDQKEVASGPPKSPWKTTAAVDSSSSPVTSDSWPALSDAQQRTPKSISV
DSRSPKSPPPLQQSAPADGAEPSSPAPPGSAEQQKSNGRGNPKASHKSSGVRPQKMGPKH
YPNGAPHFAVPLPYHQPGMPPVFHTMVPMPHIPVHGYVYQPAPGPFPSADTHVPMQAFTP
VDGSYRPSPRPGTKAYDAKSLKRRPELQDQNFQSTPRQNQQPVTSKENAQSQQPMGPRPF
MRPPFFPAPGFIDGPGFPGPAGPIYYIRPASPGSARMPYPPFFPLHPLSPGPPMVPSATV
SLRGSIVKQIEYYFSDENLQHDHYLLSLMDDHGWVPISIVADFKRVKKMSTDISFILDAL
QASTTIEIQGDKVRRRDEWSKWINHKLSPLVWSSPKTLENNDSSLSATNEMNHDKDSFDK
ANRISIRNERVVDYTSSRSSTQDVIVTDDAEKNYRAIQIGNVVSAPELVSPSKRQSTRFC
PNKAMPECSQGPSAKSDVNEGNANRCAKLPSDATKQKVEDLSNDFSSTFMLDEELELEHK
TSSKHTSATGRVDDEDEEMVVNDQAVDRLVIVTQNTRMVDESGSVVKGPNSMSCELASAI
NDGLLFYEQELKARRSNNRNKISSHENRDDSSKSSVAAPNMSKSRAVNTLAGGSSSESPG
SSSSRRKQNKGFPKQHSNFMQRLFPSTFRNHGTGRNSFGTISESPPSMSVGFFFGSTPPD
SHGIRPSKLNASPRGNSSVGSPPVGSVPKSFPAFQHPSHKLLEENGFKQQLYKKYHKRCL
GERKKLGIGCSEEMNTLYRFWSYFLRSIFVESMYNEFRKLALEDAAANYNYGMECLFRFY
SYGLEKEFREDLYADFEQLTLDFYNKGSLYGLEKYWALHHYREEHGERSPLKKHPDLDRM
LREEYPSLDDFKRAKGKFPAVKEDG
NT seq 2778 nt   +upstreamnt  +downstreamnt
atggcgatggctgagaatgagggaactggaggagatgatcaaaaggaggtggccagtggg
ccccccaagtctccctggaaaactacggcggccgttgattcttcctcatctccggtgact
tctgattcctggccggcgctttccgatgctcagcagcgcactcccaagagtatctccgtt
gattcccgctctcccaagtctcctcctccgctgcaacagtcagctccggctgacggagct
gagccttcctcacctgctcctccgggatcagctgagcagcaaaaatcaaatggccgtgga
aatcctaaggcttcacataaatcctctggagttcgcccacaaaaaatgggccctaagcac
tacccaaatggtgcaccccattttgctgtacctttaccttaccatcaaccaggaatgcct
ccagtttttcatactatggtacctatgccacacatacctgttcatggatatgtttatcag
cctgcccctggaccttttcccagtgcagacactcatgtcccaatgcaagcttttactcca
gtagatggtagctatagaccttcaccacgacctggtactaaagcatatgatgccaaatca
ttaaaaagaagacctgagctacaggaccagaatttccagtccactcctaggcaaaatcag
caaccagttacttctaaagaaaatgctcaatcccaacaacctatgggaccaaggcctttc
atgaggcctccattttttccagctccaggcttcattgatgggccaggcttcccaggtcct
gcaggacccatctactatatccgccctgcttctcctggctctgcaagaatgccttatcca
cctttctttcctctgcatccattgagccctgggcctcctatggtaccttccgcaactgta
tcactaagaggcagtattgtaaagcagattgaatattacttcagtgatgagaatctacag
catgatcactacttgctttccttgatggatgaccatggctgggttccaatatccatcgtt
gctgacttcaaaagggttaagaaaatgagtacagacatatcatttatcttggatgcactg
caggcttcaactactatagaaattcagggtgacaaggtaagaagacgcgatgaatggtcg
aagtggattaatcataaattgtcccctctagtttggtcttcccctaaaactttggagaat
aatgatagttctctaagtgctactaacgagatgaatcacgataaggacagctttgacaag
gcaaatcggatatctataagaaatgagagggtagtggattacacatcttcaagaagcagt
actcaagatgtgatagttactgatgatgcggagaagaattatcgagcaattcaaatagga
aatgttgtttctgcgccagaattggtctctccatcaaaaagacagtccacccgtttttgt
cctaataaagccatgccagaatgctcacaaggaccttcagcaaaatctgatgtcaatgaa
ggcaatgcaaatagatgtgcgaagttgccttcagatgccactaaacagaaagtagaggac
ttgtcaaatgatttttcaagcacatttatgcttgatgaagagttagaacttgagcacaag
acaagcagtaagcatacatctgccacaggaagggttgatgatgaagatgaagagatggtt
gttaatgatcaggctgttgacagacttgtaattgttacccagaatactcgcatggttgat
gaatctggaagtgttgtaaagggaccaaattccatgtcatgtgagcttgcttcggccata
aatgatggcctcttattttatgagcaggagctaaaagctaggcgctctaataatagaaat
aaaatctcaagccatgaaaatagagatgacagttccaaatcttctgtggctgctccaaat
atgtccaaatcaagggctgtcaataccttggctggaggcagtagcagtgaaagtccaggt
agttccagttctcgaaggaagcagaataaaggatttcctaagcagcattcaaatttcatg
cagcggctgtttcccagcacctttaggaatcatggaactggaaggaactcttttggaact
atatctgaaagtcctccaagcatgtcagttggattcttttttggttctacacctcctgac
agtcatgggataaggccttcaaagctgaatgcatctcctcgtggcaatagttctgtcggt
agtccacctgtaggttcagtgccaaagtcttttccagctttccagcatccaagtcataaa
ctcctagaggaaaacggattcaagcaacagttgtacaagaagtatcacaagcgatgcctt
ggtgaacgaaagaaactgggaattggttgcagtgaggaaatgaatactctttataggttt
tggtcatactttttaagaagcatatttgtagaatctatgtacaatgaattccgaaaattg
gcactagaagatgctgctgcaaattataattacggaatggagtgcctgttcaggttctac
agttatggtttggagaaggagtttagggaggacctctatgcagactttgaacaattgacg
ctcgacttctacaataaaggcagtctgtacggtctggaaaagtattgggcacttcaccat
taccgtgaggagcatggtgagagatctcctttaaagaagcacccagatttggatagaatg
ctaagggaagaatatcctagtttggatgatttcaagcgtgccaaagggaagtttccagca
gtaaaagaggatggctag

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