Coffea arabica (coffee): 113724989
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Entry
113724989 CDS
T11342
Name
(RefSeq) scarecrow-like protein 8
KO
K27748
scarecrow-like transcription factor PAT
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
113724989
Transcription factors [BR:
carb03000
]
Eukaryotic type
Other transcription factors
GRAS
113724989
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Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
113724989
NCBI-ProteinID:
XP_027103725
UniProt:
A0A6P6VML8
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Position
2c
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AA seq
708 aa
AA seq
DB search
MSSGFSGGGGPDFFTSSGIATGRSTNPMMPTMNMNMNVTNPSQLPYRSALAGILPDPAAQ
IVHRGPDLIGKRSLTEFQQQHQLLQQQQQQHQQQMGGLGPLYSNLRNVKPRVNYQHASPI
SPLSPVDLSVISSLSPEASSISNSSSPMNPRYGRPILQQFRPQQQQQQLQQPQPQPPRMM
SNCGLTATASLSNGNIIQPASSGGMPNQPNKFIPSNISSSSSVSFPNLFHNQRAVVPMPM
PVGMVTPGKQLFSAPQDQTEKKMMNKLQELEKQLFDDDDEGGCGGDAVSVVTNSEWSDTI
HSLNMITTTNCKAISPSPTSSSSSCSSTSASPPIACPKQSIADVALAISEGRMEAATEVL
TRLAQVANPRGTSEQRLTAYMTSALRSRVNPTDYPPPVTELYTAEHSDSTQMLYEVSPCF
KLGFTAANLAIQEAISGEQPAGKLHVIDFDIGQGGQYEHLLHLLATMKADKPSVLKITTL
VDSVNNGGEERLRAVRGNLEALANKLGVCLSLRVTSLRIGELNREKLGVESDEALAVNFA
FRLYRLPDESVTTENLRDELLRRVKWLSPKVVTLVEQEMGANTAPFVTRVKEACAYYGLL
LDSLEATVGRDRPDRVRIEEGVGRKLANSVACEGRDRVERCEVFGKWRARMSMAGFELKP
MSQTVGDSLRSKLHSVTRGIQGFTVNEQSGGVCFGWMGRTLTVASAWR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggggttctccggcggtggagggccggactttttcaccagctctggaatcgcc
accggaagatctaccaatccgatgatgcccaccatgaacatgaacatgaacgtgaccaac
ccttcgcagctaccctacaggtcagccctggccggaattctgccggacccggctgcacag
atcgtccaccgcggccctgacttgatcggcaaacgatctctgacggagtttcaacagcag
catcaattactccaacaacagcaacagcaacaccagcagcaaatgggtggcttaggaccg
ctttatagtaatcttcgcaacgtgaagcccagggtaaactaccagcacgcgtctcccata
tctcctctgtcgcctgtagatttatctgttatctcatctctttcgcctgaagcctcctcc
atttcgaattcttcttcgccgatgaaccctcgctacggccggcctattcttcaacaattc
cgtccccagcagcagcagcagcagctacaacaaccacaaccacaaccaccacggatgatg
agcaactgcggcttgactgcgactgctagtctatccaatggaaacatcatccaaccggcc
agctctggtggtatgcctaaccaacctaacaaatttattccgtccaatattagcagtagc
agtagcgtatcttttccaaacttgtttcacaaccagcgcgcagtcgtgcctatgcccatg
cccgtgggcatggttacccctggcaaacaattgttctcagcacctcaagatcagacggag
aagaagatgatgaataaacttcaggagctagaaaagcagctctttgacgacgatgacgaa
ggaggctgtggcggcgacgctgtctccgttgttacgaacagcgagtggtctgacacgatt
cacagcttgaacatgatcaccacaaccaactgcaaggccatttctccatctccgacatcc
tcatcgtcttcctgttcatcgacctcggcttctccgcccattgcttgccccaagcagtcg
attgctgatgtcgccttggcaatttcagaaggaaggatggaggccgcgacggaggtcctc
acgcgccttgcccaggtcgccaaccccagggggacttccgaacaaaggttaaccgcttac
atgacctcagcactccgctcgcgcgtgaaccccacggattatcccccgccggtaaccgag
ctctacaccgcggaacactcggactcaacccagatgctgtacgaggtctcaccctgtttc
aagctgggcttcacggccgcaaatttagcaattcaggaagctatctccggtgagcagcca
gcgggcaagctccacgtcatcgattttgatattggtcagggcgggcagtacgagcatttg
ctgcacttgcttgcgacgatgaaagctgacaagcccagcgttttgaagatcactactctg
gtggattctgtgaataatggaggggaggagaggctgagggccgtgcgcggtaacctcgag
gcattggccaacaagttgggggtgtgcttgagcctcagagtgacgagtttgaggattggt
gagttgaatcgggagaagttgggggtggaatctgacgaggctttggcggtgaattttgct
ttcaggctgtacaggttgccggatgagagtgtcacgacggagaatttgagggatgagttg
ctccggcgggtgaaatggctgtcgcccaaggtggtgaccctggtggagcaagagatgggc
gccaacacggcgccgtttgtgacgcgcgtgaaggaggcgtgcgcttactacgggctgctg
ttggactcgctggaggcgacggtgggcagggatcgcccggaccgagtcaggatagaggag
ggggtgggtcgtaagttggccaactcggttgcgtgcgaagggagggaccgcgttgaaaga
tgcgaggtgttcggcaagtggcgggcccggatgagcatggccgggttcgagctcaagccc
atgagtcaaaccgttggtgactcgctgcgttccaaactccactccgtgacacgtggcatt
cagggtttcaccgtaaatgaacagtccggtggtgtctgcttcggttggatgggacgaacg
ctcaccgtcgcatctgcttggcgttaa
DBGET
integrated database retrieval system