Coffea arabica (coffee): 113725023
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Entry
113725023 CDS
T11342
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
carb Coffea arabica (coffee)
Pathway
carb04145
Phagosome
carb04517
IgSF CAM signaling
carb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113725023
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113725023
09142 Cell motility
04814 Motor proteins
113725023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113725023
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
carb04812
]
113725023
04147 Exosome [BR:
carb04147
]
113725023
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
113725023
Cytoskeleton proteins [BR:
carb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
113725023
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113725023
Exosomal proteins of colorectal cancer cells
113725023
Exosomal proteins of bladder cancer cells
113725023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
113725023
NCBI-ProteinID:
XP_027103788
UniProt:
A0A6P6VLC0
LinkDB
All DBs
Position
2c:complement(2394588..2397326)
Genome browser
AA seq
447 aa
AA seq
DB search
MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYKGDNDLQLERVNVYYNEASCGRFV
PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEEGYDYEEEDEEGQEA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattttgcacattcagggagggcaatgcgggaaccagatcggagccaagttc
tgggaagtcgtgtgcgccgagcacggcatcgattccaccggcaggtacaagggagacaac
gatttgcagttggagcgagtgaatgtctactacaacgaagccagctgtgggaggtttgtc
ccgcgcgctgtcctcatggacctggagcccggcaccatggatagcgtcagatctgggccc
tacggccagattttccgccctgataacttcgtttttgggcagtccggtgccggaaataac
tgggctaagggtcactacacagaaggcgctgagctcattgactccgttctcgacgtcgtc
cgcaaagaagccgaaaactgtgactgccttcaaggatttcaggtgtgtcactcgttgggt
ggtggaactggttcaggaatggggacccttctcatttctaagatcagggaggaatatcct
gacaggatgatgctcaccttctctgttttcccatctcctaaggtgtctgacactgttgtg
gagccctataatgcgaccttgtctgtgcaccagctggttgagaatgccgatgagtgtatg
gttctggataatgaagctctttatgacatttgcttccgcacccttaagctcaccaccccc
agctttggagacttgaaccacctgatctcagccaccatgagtggtgttacttgctgcctt
cggtttcctggtcagctgaactctgatcttcgcaagctagctgtcaatcttattccgttc
cctagattgcacttcttcatggttgggtttgctccactcacatctcgtgggtcacagcaa
taccgagctctcactgtcccagaactcactcagcagatgtgggatgcaaagaacatgatg
tgtgctgctgatcctcgccatggtcgatatttgactgcttcggctatgttccgaggtaaa
atgagcaccaaggaggttgatgagcagatgattaatgtgcaaaataagaactcatcctac
tttgttgagtggattccaaacaatgtcaagtctactgtctgtgatatccctccaactggt
ttgaagatggcttccactttcattggaaattccacctcaattcaggaaatgttccggaga
gtcagcgagcaattcacagctatgttccgcagaaaggctttcttgcattggtatactgga
gagggcatggatgaaatggagtttactgaagcagaaagcaacatgaatgacttggtttct
gaataccaacaataccaagacgctactgcagatgaggaaggttatgattatgaggaagaa
gacgaagagggtcaggaagcttaa
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