KEGG   Coffea arabica (coffee): 113725023
Entry
113725023         CDS       T11342                                 
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
carb  Coffea arabica (coffee)
Pathway
carb04145  Phagosome
carb04517  IgSF CAM signaling
carb04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:carb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    113725023
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    113725023
  09142 Cell motility
   04814 Motor proteins
    113725023
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:carb03036]
    113725023
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:carb04812]
    113725023
   04147 Exosome [BR:carb04147]
    113725023
Chromosome and associated proteins [BR:carb03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     113725023
Cytoskeleton proteins [BR:carb04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    113725023
Exosome [BR:carb04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   113725023
  Exosomal proteins of colorectal cancer cells
   113725023
  Exosomal proteins of bladder cancer cells
   113725023
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 113725023
NCBI-ProteinID: XP_027103788
UniProt: A0A6P6VLC0
LinkDB
Position
2c:complement(2394588..2397326)
AA seq 447 aa
MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYKGDNDLQLERVNVYYNEASCGRFV
PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEEGYDYEEEDEEGQEA
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgcgtgaaattttgcacattcagggagggcaatgcgggaaccagatcggagccaagttc
tgggaagtcgtgtgcgccgagcacggcatcgattccaccggcaggtacaagggagacaac
gatttgcagttggagcgagtgaatgtctactacaacgaagccagctgtgggaggtttgtc
ccgcgcgctgtcctcatggacctggagcccggcaccatggatagcgtcagatctgggccc
tacggccagattttccgccctgataacttcgtttttgggcagtccggtgccggaaataac
tgggctaagggtcactacacagaaggcgctgagctcattgactccgttctcgacgtcgtc
cgcaaagaagccgaaaactgtgactgccttcaaggatttcaggtgtgtcactcgttgggt
ggtggaactggttcaggaatggggacccttctcatttctaagatcagggaggaatatcct
gacaggatgatgctcaccttctctgttttcccatctcctaaggtgtctgacactgttgtg
gagccctataatgcgaccttgtctgtgcaccagctggttgagaatgccgatgagtgtatg
gttctggataatgaagctctttatgacatttgcttccgcacccttaagctcaccaccccc
agctttggagacttgaaccacctgatctcagccaccatgagtggtgttacttgctgcctt
cggtttcctggtcagctgaactctgatcttcgcaagctagctgtcaatcttattccgttc
cctagattgcacttcttcatggttgggtttgctccactcacatctcgtgggtcacagcaa
taccgagctctcactgtcccagaactcactcagcagatgtgggatgcaaagaacatgatg
tgtgctgctgatcctcgccatggtcgatatttgactgcttcggctatgttccgaggtaaa
atgagcaccaaggaggttgatgagcagatgattaatgtgcaaaataagaactcatcctac
tttgttgagtggattccaaacaatgtcaagtctactgtctgtgatatccctccaactggt
ttgaagatggcttccactttcattggaaattccacctcaattcaggaaatgttccggaga
gtcagcgagcaattcacagctatgttccgcagaaaggctttcttgcattggtatactgga
gagggcatggatgaaatggagtttactgaagcagaaagcaacatgaatgacttggtttct
gaataccaacaataccaagacgctactgcagatgaggaaggttatgattatgaggaagaa
gacgaagagggtcaggaagcttaa

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