Coffea arabica (coffee): 113725177
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Entry
113725177 CDS
T11342
Name
(RefSeq) autophagy-related protein 3
KO
K08343
ubiquitin-like-conjugating enzyme ATG3
Organism
carb Coffea arabica (coffee)
Pathway
carb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
113725177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113725177
04121 Ubiquitin system [BR:
carb04121
]
113725177
03029 Mitochondrial biogenesis [BR:
carb03029
]
113725177
Membrane trafficking [BR:
carb04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
113725177
Ubiquitin system [BR:
carb04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
113725177
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113725177
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
113725177
NCBI-ProteinID:
XP_027103982
UniProt:
A0A6P6VQ04
LinkDB
All DBs
Position
2e:3632348..3639084
Genome browser
AA seq
314 aa
AA seq
DB search
MVLKQKIHEAFKGAVESITSHRTVSAFKEKGVLSVNEFIIAGDNLVSKCPTWSWESGEPN
KRKPYLPADKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPRESKS
DDNENLPSMDTLEISKKNTIQSFPSYFGGEDEDNIPEMDELEDVDNLIETDPATLETPYL
VAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLESKRVLEDVSQDHAHKT
VTVEDHPHLSGKHASIHPCRHGAVMKNLIDVLMSRGGEPEVDKYLFLFLKFIASVIPTIE
YDYTMDFDLGSSSS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggtactcaagcagaagattcacgaagcattcaagggtgcggttgagagtatcacaagc
catcgaacggtttccgccttcaaggagaaaggcgtcctcagcgtcaacgagttcatcatc
gccggcgacaacctcgtatccaagtgccctacttggtcgtgggaatcaggtgagccaaac
aagaggaagccgtatttacctgccgacaagcaattcttgataacaaggaatgtgccttgt
cttaggagagccgcatcagtagaggaagaatacgaggctgctgggggtgaagttttactt
gataatgaggacaacgatggttggctggccacacacgggaaacctagagaaagcaaaagt
gatgacaacgaaaatttgccttctatggacaccctagaaatcagcaagaagaataccatc
cagtcatttccatcatactttggaggtgaggatgaggacaatattccagaaatggatgag
ttagaggatgttgacaatcttattgagacagatcctgcaacacttgagactccatacctt
gtggcgcatgaacctgatgatgacaatattctgagaacccgaacatatgatgttagcata
acgtatgacaaatattatcaaactcctcgcgtatggctgactggctatgatgagtcaagg
atgcttctagaatccaagcgtgttcttgaagatgttagtcaagaccatgcacacaaaacg
gtaactgttgaggatcatccacacttgtctggaaaacatgcatccattcatccatgccgc
catggagctgtgatgaagaatctcattgatgttcttatgtcacgtggtggtgaaccggaa
gtggacaagtacctattcttgttcttaaaattcatagcctcagtgattccaactattgag
tatgattatacaatggactttgatcttggtagctccagcagctag
DBGET
integrated database retrieval system
