Coffea arabica (coffee): 113725215
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Entry
113725215 CDS
T11342
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
carb Coffea arabica (coffee)
Pathway
carb03013
Nucleocytoplasmic transport
carb03015
mRNA surveillance pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113725215
09122 Translation
03013 Nucleocytoplasmic transport
113725215
03015 mRNA surveillance pathway
113725215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113725215
03041 Spliceosome [BR:
carb03041
]
113725215
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113725215
Spliceosome [BR:
carb03041
]
Complex C
Other components
EJC/TREX
113725215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
113725215
NCBI-ProteinID:
XP_027104044
UniProt:
A0A6P6VVU8
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Position
2c:3901202..3904219
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AA seq
153 aa
AA seq
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MAETGDENAGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVT
PAVLKECRRIVVESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTAKIGSLVDVNTS
KDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacaggggacgaaaatgcaggggagttttacttgaggtactatgtcggccac
aagggtaaattcgggcatgagttcttggagttcgagtttaggcccgacggcaagctgcgg
tatgctaataattccaactataagaacgacaccatgatccgtaaagaggtcttcgtcacc
cccgccgttctaaaagaatgccgtcgcatcgtcgttgaaagcgagataatgaaggaagat
gacaacaattggccagaaccagatcgcgttggaaggcaagagctggagattgtaatgggg
aacgagcacatatcttttaccactgctaagattggttctctcgtggatgtcaataccagt
aaagatcctgaaggtcttcgaatcttctattatcttgttcaggatttgaagtgtttcgtg
ttttctcttatctcactccacttcaagatcaaacccatttga
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integrated database retrieval system