Coffea arabica (coffee): 113725309
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Entry
113725309 CDS
T11342
Name
(RefSeq) sister chromatid cohesion 1 protein 1 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113725309
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113725309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Motif
Other DBs
NCBI-GeneID:
113725309
NCBI-ProteinID:
XP_071929851
UniProt:
A0ABM4WDI5
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Position
2c:complement(4698514..4705267)
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AA seq
706 aa
AA seq
DB search
MKPCLFSRVTLSLGGAFLLRIGVRWRSNSANPEHSRRTEKICCGVEIEEDHIGMAATTKE
KITRKKLDKLDIIKICEEILNPSVPMALRLSSILMGGVVIVYERKVKLLYDDVNRLLVEL
NQAWKVQLVSDPTVLPKGKAQAKYESITLPAIREEDIEEMETLQHSNVPTTMGFTQTAYF
SMRLDNMDDSYINPNPEEDLPQDDHQANPADITLFDSHDPSMADTIMHNRFERFDIEGDE
DTQLNFAASEHATIPSTLVPSPPPQDKPYPSDEVQDHNPEAQVNQQVAKDKKVLQQDQLR
QGPTRKRARQPAAMAMDCEQTIIPGHVYQSWLQNTSDITSRRRKNSQRSGAMSKRKIANI
TELPLTVLHDGLFTYGNREVHFPAPLLELWKKCTQPAHDSASGGTWTRQPPDPSSSSQPE
RIHKRDPIGYPIEDFHSGVGSQTEEISIEKQRTNHDISMQPEILMEEIGTDTANTKVPFS
GAYIGALSQSNLMATPGDSSDEVRSIPSSGSGHGFLSNDSEVNLARSNMKRPHSSPRHRV
YGLEPVAEENSSHPNFKLSRLSENGLIPDNELMVETGPTQTQKHPIAGQTNDQITRSIQM
QDFAIIFLNNLLLFTRDFEYIVCVIHSLLEHGVYRQLKAHFETPGSSEAESLNQLARGMD
KKRAAALFLRTCDEAILLAVLATQDVIRVQQKKPYGDILISRGPKM
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccttgcttgttttcaagagtaaccctatccctcggaggagcattccttcttcgc
atcggcgtacgttggcgctcaaattcggcaaatccagaacactcaagacggacggaaaaa
atatgctgtggtgtagaaattgaagaagatcatatagggatggcggctacgaccaaagag
aagattacccgtaaaaaactggacaagctcgacattatcaaaatctgcgaagagattttg
aatccatcggttccaatggctctcagactctccagtattctcatgggtggagtcgtcatc
gtctacgaacgcaaagtgaaactcctctacgatgatgtaaatcgtctcctggtggagtta
aaccaagcttggaaagttcaattagtgtcagatccaaccgtattgcctaagggcaaagct
caagccaaatatgaatccattactctaccagcaattagggaggaggatattgaagaaatg
gaaactcttcaacattctaatgtgcccacaacaatggggtttacacaaactgcctatttt
tcaatgaggctggataacatggatgattcctacatcaatccaaatccggaggaggatctt
ccgcaggatgaccatcaagctaatccagctgatatcactttatttgatagccatgatcca
tctatggcggacacaatcatgcataaccgctttgaaaggtttgatattgaaggagatgag
gacacacaattgaactttgcagcttcagaacatgctactattcctagtactcttgtacct
tctccacctcctcaagacaaaccctatccatctgatgaagtacaggatcacaatcctgag
gcccaagtaaatcagcaggttgctaaagacaagaaagttcttcagcaggatcagttaagg
caaggtccaactcgaaagagagcaaggcagcctgctgccatggcaatggactgtgagcaa
accattatccctggtcacgtatatcaatcttggcttcagaacacctccgatattacctca
agaagaagaaagaatagtcagcgatcaggtgccatgtccaaaaggaagatagcaaatatc
acggaacttcctcttaccgttctacatgatggattattcacttatgggaacagagaagtg
cattttcctgctcctcttcttgaactatggaaaaaatgtacccagccagctcatgattca
gcttcgggtgggacttggacacgtcaaccccctgatccatcatcgtcatctcaaccagag
cgaatacataaacgagatccaattggttatcccattgaagattttcatagtggtgttggc
tctcaaactgaggaaatttccatcgagaagcagaggacaaatcatgacataagcatgcaa
cctgaaattcttatggaggagataggaactgatactgcaaataccaaagtgccattttct
ggggcttacataggggccctcagtcagagcaacctgatggcaacaccaggagattccagt
gatgaagtaagatcgatcccgagctcggggtctggtcatggtttcctgtcaaatgattca
gaagtcaatttggcaaggtccaacatgaaaagaccacactcttcacctaggcacagagtt
tatggccttgaaccggtggcagaggagaactcgtcgcatccaaacttcaagttgtctaga
ctatctgaaaatggtcttataccagataatgaacttatggtggaaactggaccaacgcaa
acccagaaacatccaattgctggtcaaactaatgatcagatcactcgttcgattcaaatg
caagactttgcaatcatatttttgaataatcttcttctctttactcgtgactttgagtat
atagtttgtgtaattcattctcttttggaacacggcgtctacaggcagctgaaggctcat
tttgaaacaccaggatcttctgaagcagaatctttgaaccagctggctagaggaatggat
aagaaaagggcagcagctcttttcttacggacttgtgacgaggcaattctgctggcagtt
ctagctacccaagacgtcatcagagttcagcagaagaagccatatggggatatactcatc
tcaagagggccaaagatgtga
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