Coffea arabica (coffee): 113725507
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Entry
113725507 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113725507
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
carb04812
]
113725507
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
113725507
Cytoskeleton proteins [BR:
carb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
113725507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
Zn_ribbon_IFT122
Motif
Other DBs
NCBI-GeneID:
113725507
NCBI-ProteinID:
XP_071912520
UniProt:
A0ABM4UZ35
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Position
1e:42376742..42390876
Genome browser
AA seq
1237 aa
AA seq
DB search
MSMAVEANMVAALLEKLKVDDPWVQPQPWESIPSESGRRQNPSTSRSQSSHGLYPISNLS
ESSLVRLVLTALQGLESALIAVDQLSALFCSVSADRTFHRISSLWSRSSSTRSLGNLLKS
IGQFGCIVFLLHKFVAYFSHLNADGDSGLQTTPKEVNGENKAQSEFKGSVVNQAFAVAVK
KILDGYISALNTVHTSVSLRRNLKNSNGGCLTSVGDTEVTVLEVYLHTKGLRTQIEALGN
ICQICDTAYSFSLSSFEDLSAKANLEFANFPRGGTLLTFLYTQLKVVDPAQIVLLKFLFL
QAFEPYYHFIRSWIYGGRMSDPYKEFAMEYVDYLPGYGWANAGISMEFPLSTVRVRDGVT
LPCFLEDFLIPLLRAGQQLQVVMKLLDLCYSLGTYNNAQEEILPFLDEFSNEYPFFASPL
TFDKETMGRMALARSSYYQRMLEKVDNVLTRFGFRSQKESPYTIQFFFSKNHGRNPKHAE
ATLDDNLVPAVMEEDAGIFQNEASSTADELSCAEDLLESSESSSLNSFDEHNDSEQMPND
NMGFQPSYLSSVSFSFGLSAENSVWKPFKSEISCFSENFSKVGEKTQEACHGMDSYYEGS
NMNRNSSTLQFAEQNLLLSAESKIINIEPDECLRAGCMADSLSYLNGGNNSGTWFDMTGS
ALEVRKSMLGECKASMLNCSDTTLPRIAITEMTKNRHQHGDGNCASSNSLCVQPWTSKYN
TSLLSMNPTLMKGSFINNNDMLEERGLKYKDPLSYFDFTSVRDPCQVCQEKLASTSGREC
GFGNSIPTETTADAAIITSDYYCKDCINKDKEERMKRSLVYLSSHSVMDRGKDALCADLT
GGSDWETILACFGTNTNVTEKGYRTSSSAVFDMPLDYVIEKCLWEEILLQYKYVSRLTLK
LLEEGFDLQEHLLALRRYHFMELADWADLFIMSLWHHKWHVMEVDKRILEIQGILELSVQ
RSSCEGDFNKDRLYVYIKGDCVMPLSASAKGIRSFDFLGLGYRVDWPVSIILTPDALKIY
SNIFNFLIQVKLAVFSLSDAWCSLKDIVKLTRWSEPSDRLKPTLQHISALTETRYQVFHF
ITTLQQYVQSKLSHVSWRKFSDSLKHKVKDIIDLEAVHMEYLTESLHICFLSDELRSIAK
IIQSILQCAVDFQSCLSQCTLEVGPSGKDPELRQIDIVQVLNIKKTFAKNINDLFLCYRK
SPKHGEFGLSRFWDYLNYNDYYTEGRGRQLEHGVLYV
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggcggtggaggcgaatatggtggcggcattgttggagaagctcaaggtcgat
gatccatgggtgcaaccacaaccatgggaatcaatcccttccgagagcggccgccgccaa
aatccttcgacttctcgttctcagtcctcccatggcctctatcccatttccaatctctcc
gagtctagtttagtgaggttggtactgactgctctgcaggggttagaatcggctctgatt
gctgttgaccaactctctgcgctgttttgttcagtttcagcagatagaactttccataga
atctcaagtttgtggagtaggtcttcgagcactcgttctttgggaaatttactaaaatcc
attggccaatttggctgcattgttttcctcctccacaaatttgttgcatatttttctcat
ttaaatgctgatggagattcaggattacaaacaactccgaaggaggttaatggagagaac
aaagcacagtcggaatttaaaggcagtgttgtcaatcaggcatttgcagttgctgtgaaa
aagatcttagatggctatatctctgccctgaatacagtacacacttcagtgagtttgagg
cgtaatttgaagaactctaatggtggctgtctaacaagtgttggtgatactgaagttaca
gtattggaggtttatttgcatacaaaagggctaagaacccagatagaagcccttggaaat
atttgtcagatatgtgatacagcttatagtttctcgctatcatcttttgaagatttaagt
gctaaagcaaacctggaatttgccaattttccaagaggtggtactttgttgacctttctg
tatacacaactaaaggttgttgatccagctcagattgttctactcaagtttctttttctc
caggcatttgaaccatactatcattttattaggtcatggatttatggaggcagaatgagt
gatccatacaaagagtttgcgatggaatatgttgattatctaccgggttatggatgggct
aatgctggaatttctatggaattcccattaagcactgtcagggtccgggatggagttact
ttaccatgttttcttgaagattttttgattccacttctcagagctggtcagcagcttcaa
gttgtaatgaagctgcttgacttgtgttacagtcttggcacatataacaatgctcaagag
gagattcttcctttcttggatgagttttcaaatgaatatccattttttgcttccccattg
acatttgacaaagaaaccatgggaagaatggcacttgcaagaagcagttactaccaaagg
atgcttgaaaaagtggacaatgttctaactagatttggatttagatctcaaaaggaatct
ccctacactattcagttctttttttcgaaaaaccatggaagaaatccaaagcatgcagag
gctacgctggatgataacttggttcctgctgtaatggaagaggatgccggcatttttcaa
aatgaggcttctagcactgcagacgagttgtcgtgtgcggaggatctgttggaatcatct
gaatcatcatctcttaacagttttgacgagcacaatgattctgaacagatgcctaatgat
aatatgggatttcaaccaagttatttatcttctgtgagcttcagctttggtttatctgct
gagaattcagtatggaagcctttcaaaagtgagatttcatgcttctcagagaatttttcc
aaagtaggtgaaaaaacacaggaagcttgtcatggcatggattcctattatgaaggatcc
aatatgaacagaaattcttccactcttcaatttgcagagcagaacttgttactgagtgct
gagtccaaaattatcaacattgaacctgatgaatgcctgcgagctggctgcatggctgac
agtctctcctatttgaatggaggaaacaatagtggtacatggtttgatatgactggttca
gcactggaagtgagaaagagcatgcttggagagtgcaaggcaagcatgttaaattgtagc
gacactacactcccaagaattgctatcacagaaatgacgaaaaataggcaccagcatgga
gatggaaattgtgcttcatcaaattcgttatgtgtgcagccatggacctctaaatacaat
acgagtttgctgagtatgaacccaactttgatgaaaggctctttcattaataacaatgac
atgcttgaagagagagggttgaagtataaagatcctttatcttactttgatttcacatct
gtgagagatccttgtcaagtttgtcaggaaaagttggcttccacttctggacgtgagtgc
ggattcggaaattcaataccaactgagactacagctgatgctgcaatcattacaagtgat
tactattgtaaagactgcattaacaaggacaaagaggaaaggatgaaaagatccctggtt
tatctctcatcacattcagtgatggatagggggaaagatgccttatgtgctgaccttact
ggtggaagtgactgggaaactatacttgcttgttttggcaccaacactaatgttactgaa
aaaggttacaggacaagttcatcggctgtctttgatatgccgctggattatgttattgaa
aaatgcctctgggaggagattttgcttcagtataagtatgtaagcaggctaacactcaag
ttgcttgaagaaggatttgatttgcaagagcatctgttagcactgcggcgatatcacttt
atggaactagcagactgggcagatttgtttatcatgtctctgtggcatcataagtggcat
gtcatggaagttgataaaagaattctagaaatccaggggatactcgagttgtcagttcag
aggtcttcatgtgaaggagactttaacaaggaccgtttatatgtttatatcaaaggagat
tgtgtgatgccactttcagcttctgccaaaggaatacggtcatttgattttttaggtttg
gggtacagagtggattggcctgttagtatcattttgacgccagatgcattgaagatttat
tccaacattttcaattttctgatacaagtcaagcttgctgttttctctttaagtgatgca
tggtgctcattaaaggacatagtaaagttgactaggtggagtgaaccttctgatcggctt
aagcctactcttcaacatatttctgctttgactgaaaccagatatcaagtttttcatttc
ataaccacactgcagcaatatgttcaatcaaaattatcccatgtatcttggcgcaagttt
tcagactctcttaagcacaaggtcaaagatattatcgaccttgaggcagtgcatatggaa
tatctcactgaatcactgcatatatgtttcttatctgatgaattacggtcaattgctaaa
atcatccaaagcattctacaatgtgctgttgactttcaatcttgtctgagtcagtgcact
ttggaggttgggcccagcggaaaggacccagagcttcgtcaaattgacattgtacaggtg
ctgaatattaagaaaacatttgcaaagaacatcaacgatttgtttttgtgttaccgcaag
tcaccaaaacatggagaatttggcctttcacgcttctgggactatctcaactataatgat
tactacacggagggtaggggtagacaactagagcatggtgttctttacgtttaa
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