Coffea arabica (coffee): 113725508
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Entry
113725508 CDS
T11342
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
113725508
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
113725508
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GFIT
Other DBs
NCBI-GeneID:
113725508
NCBI-ProteinID:
XP_027104514
UniProt:
A0A6P6VNE0
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Position
2c:6815436..6821181
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AA seq
1320 aa
AA seq
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MNNLKLSWELPSKLQLHSEDEVVQFAAFDIERNRIFFASSANFIYTTHIPSPQDEGTWGS
ASLSAAADSIDMEPGDYITSMDYLMEKEALIIGTSYGLLLLYIVDDGTTEVVGRVEGGIK
CISPSPDGDLLGVVTGFGQILVMTHDWDVLYEMALDDHPGDVDVHEPAVSSNYSCESPIS
WRGDGKFFATLSKVHDALPLRKKLKVWERDSGALHSVSEPMGFMGAVLDWMPSGAKIASV
YDRREEKNSPSIVFFEKNGLQRSSFGVNDNTDVKVDSLKWNCNSELLAFVVRGEDHESIK
IWFFNNNHWYLKQEIRYLKQDGVKFIWDPTKPLQLISWTVDGQIMIYNFMWITAVMDNST
AFVIDDSKILVTPLSVSLIPPPMYLFSLKFPSAVRSMAFFSHGSKHNLATFLSDGRLCIV
ELPEIDMWEELEGTEVSVEAASCDIGFGSFTHLAWLDSHVLLSVSHFTVNQINCSLGNFS
SKDGLPAYYLQEIQVMCSEDHKPGPVTSTGWQAKISNQISVEERVIGIIPGPLNRCSAYI
QFDGGKIVQYLSKLGGNRVVPLQKCDDMCFSSSCPWMTLALAEGFVSQKALLFGLDDNGR
LQVGRRILCDNCSSFSFYSNATDQSIAHLILSTKQDLLFIVDIADIQNEQLAVKYGNFLP
AFKTRTGDDGRNYINIWERGARVIGVLHGDESAVVIQTIRGNLECVYPRKLVLASIINAL
VQGRFRDALYMIRRHRIDFNVIVDHCGLKAFIQSAPEFVKQVSNLSYITEFVCAITNGNV
METLYKDYILLPCQKELNTVKSGYADNSDSNSKISAVLLAIRKALEEQIVESPSRELCIL
TTLAQSQPPALEEALTRIKFVRQMELSGSDGPGRNNYPSAEESLKHLLWLSDPEAVFEAA
LGIYDLKLGAMVALNSQKDPKEFLPFLQELERMPAALMQYNIDLRLQRYENALRHLVSAG
DGYYEDCMRLMRSYPQLFPLGLKLISDPVKKAQILDAWGDHLSSMKSFEDAAVTYLCCSS
LEKALKAYRSSGNWRGVLTVAGLIKSGKEEVIQLAYELCEELQALGKPGDAATIALEYCG
DVKAGIDLLVSARDWEEALRIAFLHLRDDLVSEVKIACLECANLLIGEYEEGLEKVGKYV
ARYLAVRQRRLFLAAKLRSDEQSVAELDDETASEVSSSFSGMSAYTTGTRRGSAASISST
STKGRGRQRNKGKIRAGSPGEEMALVEHLNGMALATGAKHEIKSLLMSLLMLGEEDLARK
LQRACENFQLSQMAAVKLAEDAMLTDSMDDYVYSLEHYIQKVRKEVHNLEAFSWQSRVLV
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctgaagctctcatgggagctaccgtcgaagcttcaattacactcggaagat
gaagttgtccaatttgcagcatttgatattgaacgcaaccgtatcttcttcgcctcctcg
gccaacttcatatacacaactcatattccatctcctcaagatgaaggaacatggggttca
gcttcattatctgcagcagctgactctattgatatggaaccgggagattacattacttcc
atggattatctgatggagaaggaagcactgataattgggacttcgtatgggcttctcttg
ctatatattgtggatgatggtaccacagaagtggtcgggcgagtggagggtggcataaag
tgcatttcgcctagtccagatggagatttgcttggtgtcgttactggcttcggtcaaata
ctagtgatgacgcatgattgggatgtgctatatgagatggcactggatgatcatcctggg
gatgttgacgtacatgaaccagctgtctcctccaactattcttgtgagagtcccatttct
tggcgaggtgatggcaaattctttgcaaccctaagcaaagtgcatgatgcacttccctta
cgtaaaaaacttaaagtttgggaacgagattcaggtgcacttcactctgtctcagaacca
atgggtttcatgggagcagttttggactggatgcccagtggcgcaaaaattgcatctgtt
tatgatcgaagggaagaaaagaattccccatcaatagttttctttgagaagaatgggttg
caacgaagctcatttggtgttaatgataacactgatgtaaaggtagactctttgaagtgg
aattgtaactctgagcttcttgcatttgtggttagaggtgaagatcatgagtctatcaag
atttggttcttcaataataatcattggtatttgaaacaagagattagatacttaaagcag
gatggagttaaattcatctgggatccaacaaagccactacagttgataagttggactgtc
gatggccagataatgatatacaatttcatgtggatcacagctgtcatggataactcaaca
gcatttgtaattgatgactccaagatactagtcaccccactttctgtttctctgattccc
cctcctatgtatttatttagtttaaaatttcccagtgcagttcgaagtatggctttcttt
tctcacggttctaaacataatctggccacatttttatcagatggcaggttgtgtattgta
gagcttcctgaaatagatatgtgggaggagctagaaggcactgaagtcagtgttgaggct
gcctcatgtgatattggatttggatcttttactcacctggcatggttggactcacatgta
cttcttagtgtttctcattttaccgttaatcagattaattgctcattaggaaacttttct
agcaaggatgggctgcctgcctattacctgcaagaaattcaggtcatgtgttctgaagat
cataaacctggtcctgtaacatccacaggctggcaagctaaaatttccaaccaaatttct
gttgaagaacgggtaattggaataatccctggcccactaaatagatgttcagcatatatt
cagtttgatggtggaaaaatagtccaatatttgtcgaagttagggggcaacagagtggtt
cctcttcagaaatgtgatgacatgtgtttctcatcatcatgcccatggatgactttggct
cttgctgaggggttcgtgtcacagaaggctttactttttggacttgatgacaatggaagg
cttcaagtcggtcgaaggatattatgtgacaactgcagcagtttctcattttattcgaat
gccacagaccaatcaatagcacatttgattctttcaactaaacaggatctgctatttatt
gtagacattgctgatattcaaaatgaacaactggctgttaaatatgggaatttcctacct
gctttcaagactagaactggagatgatggaagaaactatataaacatatgggaaagaggt
gctagggttataggtgtgctacatggagatgagtctgctgtcgttattcaaacaattcgt
ggaaatcttgaatgtgtctacccaaggaaactggttctggcctcaatcatcaatgccttg
gtccaggggcgctttagagatgcgctatacatgatacggcgacataggatagactttaat
gttattgttgaccactgtggtttgaaagcctttattcagtcagctccagaatttgtgaaa
caggtgagcaacttgagctatataactgagtttgtttgtgctatcacaaatggaaatgtg
atggagacgttgtataaggattacatattgctaccttgtcaaaaggagttgaacactgta
aaatctggatatgctgacaattctgatagtaacagcaagatttctgctgtcttgttggcg
ataagaaaggccctggaggagcaaatagtggaaagtccttcaagggaactttgcattttg
actacattggctcaaagccaacctccagctcttgaggaggctttgacaaggataaaattt
gtccgacaaatggagctatcaggttctgatggtccaggacggaacaattatccttctgct
gaggaatctttaaagcatctgttgtggttgtctgatccagaagcagtttttgaagctgct
ttaggaatttatgatttgaaactaggagctatggttgcattaaactcacagaaggatcca
aaagaatttcttccatttcttcaagaattagaacgtatgccagctgcattaatgcaatat
aatattgaccttagactgcaaaggtatgaaaatgctttgcgacatcttgtttcagctgga
gatggttattatgaagattgcatgaggctcatgagaagttatcctcagctcttccccttg
ggtctgaaactcatcagcgatcctgttaaaaaagcacaaattcttgatgcatggggagat
catttgagttcaatgaaatcctttgaagatgctgctgtcacttacttgtgttgttcttct
ttggaaaaagctctgaaagcttatcgttcttctggtaattggagaggagttcttacagtt
gctgggctgatcaaatctgggaaggaggaagtaatacagctggcatatgaactctgcgag
gagctccaggcacttggtaaaccaggagatgctgccacaatagccttggagtactgtggt
gatgtcaaggcaggtattgatcttttggttagtgcaagggattgggaggaggctctgagg
attgccttccttcacttgagggatgatttagtctcagaagtgaaaattgcttgtcttgag
tgtgccaacttgctgattggtgaatatgaggagggtttagagaaagtagggaagtatgtg
gcacgctacctagctgttcgacagaggaggttattccttgctgcaaagcttcggtcagat
gagcagtcagtagctgagcttgatgatgaaactgcttcagaagtgagcagtagttttagt
ggaatgagtgcatacaccactgggacaaggaggggttcagctgcttcgatcagttcaacc
tctacgaaggggagagggcgtcagcgaaataagggaaaaattcgtgctggcagccctggt
gaggagatggctttggttgaacatttgaatggaatggctttggctactggagcaaaacac
gagattaaatctcttttaatgtcccttctgatgcttggagaggaagatcttgctaggaaa
ttgcaacgcgcttgtgaaaattttcaactgtcccaaatggcagcagtaaaattagctgaa
gatgcaatgttgactgatagcatggatgactatgtgtattccttggagcattacattcag
aaagtgaggaaagaagtacacaatttggaagctttttcttggcagtctagagttttggtt
tga
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