Coffea arabica (coffee): 113725526
Help
Entry
113725526 CDS
T11342
Name
(RefSeq) beta-hexosaminidase 1-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00511
Other glycan degradation
carb00513
Various types of N-glycan biosynthesis
carb00520
Amino sugar and nucleotide sugar metabolism
carb00531
Glycosaminoglycan degradation
carb00600
Sphingolipid metabolism
carb00603
Glycosphingolipid biosynthesis - globo and isoglobo series
carb00604
Glycosphingolipid biosynthesis - ganglio series
carb01100
Metabolic pathways
carb04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
113725526
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
113725526
00513 Various types of N-glycan biosynthesis
113725526
00531 Glycosaminoglycan degradation
113725526
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
113725526
00604 Glycosphingolipid biosynthesis - ganglio series
113725526
00511 Other glycan degradation
113725526
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
113725526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
carb03110
]
113725526
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
113725526
Chaperones and folding catalysts [BR:
carb03110
]
Intramolecular chaperones
Others
113725526
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
113725526
NCBI-ProteinID:
XP_027104544
UniProt:
A0A6P6VNH1
LinkDB
All DBs
Position
2c:complement(7088487..7097245)
Genome browser
AA seq
551 aa
AA seq
DB search
MPSKRPTLFFLLFPFLLSISLSFPTPVNSSRTLSLHKSKLHFDDQSLTLLWPLPAQYTFG
NHTLTVDPNLSLVLSGNGGASGIVKEAFQRYKDLIFKHSSKVPSTSRVVYDIQKLSIIVQ
SDNEELQLGVDESYSLLVGKNDEHSIIGEATIEANSVYGALRGLETLSQLCVFDYGAKTV
LVSKAPWFIQDKPRFEYRGLSLDTSRHYYPIDVIKQVIESMSYAKLNVLHWHIIDEESFP
LEVPRYPKLWKGAYSKWERYTVEDAQEIVSYAKMRGINVMAEVDVPGHAESWGKGYPDLW
PSPSCTEPLDISKNFTFDVISGILAGMREIFPFKFFHLGGDEVNTDCWNSTPHVKQWLQD
HNMTVKDGYQYFVLKAQEIALSLNWTPVNWEETFNTFPSKLNPQTVVHNWLGPGVCPKAV
AKGFRCIFSNQGVWYLDHLDVPWNETYYAEPLEGIKDASEQRLVLGGEVCMWSETADTSD
VQQTIWPRAAAAAERLWSDREATSAPDTKLSALNRLEYFRCLLNRRGVAAAPVRNQYARR
PPVGPGSCYDQ
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaaaacgcccgactctctttttcttgctcttccctttcctcctgtccatctct
ctatcgttcccgactccggtcaattcttcgcgaactctgtcacttcacaagtcaaagctc
cacttcgatgatcaatccctcactttgctctggcccttgccggctcaatacactttcggc
aatcataccctcaccgtcgatcctaatctctcgcttgtgcttagcggcaatggcggcgct
tctggtatcgttaaagaagcttttcagagatataaagatcttatctttaagcattcttcc
aaagtacccagcacttctcgagttgtctatgatattcagaagcttagcattattgttcag
tccgacaatgaagagttgcaacttggagtagatgagagctattcgttgttggtgggaaag
aatgacgaacattcgattatcggggaagccaccattgaggctaattctgtgtatggcgca
ctacgtgggttggagacattgagccaactgtgtgtatttgattatggagctaaaactgtg
ctagtgtccaaagcaccatggttcattcaagacaagccaaggtttgagtatcgtgggctt
tcgcttgatacttcaagacactattatcccattgatgttatcaagcaagtcattgaatca
atgtcctatgctaaacttaatgtccttcactggcacatcatagatgaagagtcctttcct
ctggaagtgcctagatacccaaagttgtggaaaggggcatattccaaatgggaacgctat
acggttgaggatgcccaagaaattgttagctatgcgaaaatgagaggtatcaatgtcatg
gcagaagttgacgtccctggtcatgcagagtcatggggtaaaggttatcctgatctctgg
ccttcgccctcttgcacagagcccctggacatttctaaaaactttacctttgatgtgatt
tctggcatccttgcaggcatgagggaaatctttccattcaagttctttcacttaggtggt
gatgaggtaaatacagattgttggaactctactccacatgtgaagcaatggctgcaagat
cataatatgactgttaaagatggatatcaatattttgtgctcaaagctcaagaaatagcc
ttgtcacttaattggacccctgtcaactgggaggagaccttcaacacatttccatctaaa
ctcaaccctcaaactgtggtgcataactggttgggtcctggtgtatgcccaaaggctgtt
gcaaagggttttagatgcatttttagcaatcaaggtgtctggtacctagaccacttagac
gtgccatggaatgagacctactatgctgagccactggaaggaataaaagatgcctctgaa
caaagacttgtgcttggaggagaagtatgcatgtggagtgaaacagctgatacctctgat
gttcaacaaacaatatggcctcgagctgcagcagcagcagagcgcttgtggagtgacagg
gaggcaacatctgcaccagatactaagttaagtgcattgaatagattggaatacttccgc
tgcctcttgaataggcgcggagttgcggctgctccagttagaaaccaatacgctcgaaga
cctccagttggtcccggatcatgctatgaccagtaa
DBGET
integrated database retrieval system