Coffea arabica (coffee): 113725569
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Entry
113725569 CDS
T11342
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
carb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113725569
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113725569
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
carb01009
]
113725569
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
113725569
03036 Chromosome and associated proteins [BR:
carb03036
]
113725569
Protein phosphatases and associated proteins [BR:
carb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
113725569
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
113725569
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
113725569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
Phage_Inh_C
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
113725569
NCBI-ProteinID:
XP_027104607
UniProt:
A0A6P6VRP5
LinkDB
All DBs
Position
2c:complement(7436041..7445811)
Genome browser
AA seq
538 aa
AA seq
DB search
MELDFNSDVACLDADLLQLPEVAPLAIKDNPCVAEKLFDQWLSLPDTGSLVKSLINNAKG
GGPLNVSGTSSNTSSAASNSLPSMFPAGSTPPLSPRSSSGSPRTTKQQRASVLGSPLKLV
NEPVKELIPQFYFQNGRPPPNEMKERCLFRINQFFYGHMDGLQMHEFKPVTKEICKLPSF
FSSALFRKMDLDGTGIITKDAFVDYWVNGNMLTKDIATQIFTILKQPDFRYLTQDDFKPL
LRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYVNRSGNGRLTLRELKRSNLIAAMQH
ADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFS
QVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNELQFFYE
EQLHRMECMAQEPVLFEDILCQMVDMISPENESYFTLRDLKGSRLSGSVFNILFNLNKFM
AFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDAEDASNGSADVWDESLEAPF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagttagattttaacagtgacgtggcgtgtctcgatgccgacttgttgcagctgcca
gaggtggctcctttggctatcaaagataacccttgtgtcgccgagaagcttttcgaccaa
tggctttcgcttcctgacaccggttcattggtcaaatctttaattaataatgccaaggga
ggtggtcctttaaatgtttctggaacatcttctaacacaagttctgctgccagtaattca
ttgccttccatgtttcctgccggcagcacgcctccactttctccaagaagttcatctggt
tcccctcgaaccaccaagcaacaaagggcctctgtattgggttctcctttaaaattagtg
aatgaaccagttaaagagcttatacctcagttttactttcaaaacggccgtccacctcca
aatgagatgaaagagcggtgtttgtttaggatcaatcagttcttttatggccacatggat
ggattacaaatgcatgaatttaaacctgtgacaaaggaaatttgcaagctgccatcattc
ttctccagtgcacttttcagaaagatggatcttgatggtacagggatcattaccaaagat
gcctttgttgactactgggtaaatggcaacatgttgacaaaagatattgctacgcagata
tttacaatattgaaacagccagatttcagatacctgactcaggatgacttcaaacctcta
cttcgagaacttttggcaactcatccaggcttggagttcttacagagtacacctgaattt
caagagagatatgctgaaactgtaatatacagaatattttactacgtgaatagatcgggt
aatggtcgtcttaccctcagggagcttaaacgttcgaacttaattgctgcaatgcaacat
gctgacgaggaggaggatattaacaaggttttgaggtacttctcgtatgaacacttttat
gtgatatattgcaagttttgggagctggacacagatcatgattttttaattgataaagag
aaccttataagatatggcaaccatgcgcttacctacagaattgtcgataggatattttct
caggtgccaagaaagttcaccagcaaggttgaaggaaagatgggatacgaagattttgtt
tatttcatattgtcagaggaggataaatcatcggaacctagtcttgaatactggtttaaa
tgcatagatttggatgggaatggggtcataacaaggaatgaactgcaattcttctacgag
gagcagttgcatagaatggaatgcatggcccaggagcctgtactttttgaggatatttta
tgccagatggttgacatgataagtccagagaatgaaagctactttacattacgtgacctg
aaaggaagcaggctgtcaggcagtgtattcaatatccttttcaacctcaataagttcatg
gcatttgagacccgtgatccttttctaatccgtcaggagcgtgagaacccaacattgaca
gagtgggatcgttttgcccaccgagaatatattaggctctcaatggaggaagatgcggag
gatgcctctaatggaagtgcagatgtttgggatgaatcacttgaggctccattttga
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